Геном прокариот/Материалы:NC 007716
Внешний вид
Базовый уровень статей | |
LOCUS NC_007716 706569 bp DNA circular BCT 29-JUN-2007 DEFINITION Aster yellows witches'-broom phytoplasma AYWB, complete genome. ACCESSION NC_007716 VERSION NC_007716.1 GI:85057280 KEYWORDS . SOURCE Aster yellows witches'-broom phytoplasma AYWB ORGANISM Aster yellows witches'-broom phytoplasma AYWB Bacteria; Firmicutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma asteris. REFERENCE 1 (bases 1 to 706569) AUTHORS Bai,X., Zhang,J., Ewing,A., Miller,S.A., Jancso Radek,A., Shevchenko,D.V., Tsukerman,K., Walunas,T., Lapidus,A., Campbell,J.W. and Hogenhout,S.A. TITLE Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts JOURNAL J. Bacteriol. 188 (10), 3682-3696 (2006) PUBMED 16672622 REFERENCE 2 (bases 1 to 706569) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (18-JAN-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 706569) AUTHORS Bai,X. and Hogenhout,S.A. TITLE Direct Submission JOURNAL Submitted (06-APR-2005) Department of Entomology, The Ohio State University - OARDC, 1680 Madison Avenue, Wooster, OH 44691, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000061. Sequencing Center: Integrated Genomics, Inc., 2201 W. Campbell Park Dr., Chicago IL 60612. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
84386 | 84459 | + | 74 | 85057280 | AYWB_t01 | - | 12 Thr tRNA |
84479 | 84553 | + | 75 | 85057280 | AYWB_t02 | - | 01 Gly tRNA |
100927 | 101012 | + | 86 | 85057280 | AYWB_t03 | - | 15 Leu tRNA |
117618 | 117693 | + | 76 | 85057280 | AYWB_t04 | - | 04 Glu tRNA |
117707 | 117783 | + | 77 | 85057280 | AYWB_t05 | - | 11 Arg tRNA |
117809 | 117885 | + | 77 | 85057280 | AYWB_t06 | - | 03 Pro tRNA |
117914 | 117988 | + | 75 | 85057280 | AYWB_t07 | - | 01 Gly tRNA |
271733 | 273268 | + | 1536 | 85057280 | AYWB_r01 | - | 16S ribosomal RNA |
273371 | 273447 | + | 77 | 85057280 | AYWB_t08 | - | 14 Ile tRNA |
273511 | 276378 | + | 2868 | 85057280 | AYWB_r02 | - | 23S ribosomal RNA |
276412 | 276520 | + | 109 | 85057280 | AYWB_r05 | - | 5S ribosomal RNA |
276546 | 276621 | + | 76 | 85057280 | AYWB_t09 | - | 13 Val tRNA |
276675 | 276750 | + | 76 | 85057280 | AYWB_t10 | - | 12 Thr tRNA |
276758 | 276833 | + | 76 | 85057280 | AYWB_t11 | - | 10 Lys tRNA |
276895 | 276980 | + | 86 | 85057280 | AYWB_t12 | - | 15 Leu tRNA |
276989 | 277064 | + | 76 | 85057280 | AYWB_t13 | - | 02 Ala tRNA |
277103 | 277179 | + | 77 | 85057280 | AYWB_t14 | - | 16 Met tRNA |
277181 | 277257 | + | 77 | 85057280 | AYWB_t15 | - | 16 Met tRNA |
277372 | 277448 | + | 77 | 85057280 | AYWB_t16 | - | 16 Met tRNA |
277454 | 277529 | + | 76 | 85057280 | AYWB_t17 | - | 06 Asp tRNA |
277532 | 277607 | + | 76 | 85057280 | AYWB_t18 | - | 17 Phe tRNA |
332065 | 332149 | + | 85 | 85057280 | AYWB_t19 | - | 15 Leu tRNA |
465962 | 466038 | - | 77 | 85057280 | AYWB_t20 | - | 11 Arg tRNA |
492919 | 492995 | + | 77 | 85057280 | AYWB_t21 | - | 07 Asn tRNA |
493003 | 493078 | + | 76 | 85057280 | AYWB_t22 | - | 13 Val tRNA |
493104 | 493212 | - | 109 | 85057280 | AYWB_r06 | - | 5S ribosomal RNA |
493246 | 496113 | - | 2868 | 85057280 | AYWB_r03 | - | 23S ribosomal RNA |
496177 | 496253 | + | 77 | 85057280 | AYWB_t23 | - | 14 Ile tRNA |
496356 | 497891 | - | 1536 | 85057280 | AYWB_r04 | - | 16S ribosomal RNA |
498007 | 498090 | + | 84 | 85057280 | AYWB_t24 | - | 18 Tyr tRNA |
502573 | 502664 | + | 92 | 85057280 | AYWB_t25 | - | 08 Ser tRNA |
502793 | 502866 | + | 74 | 85057280 | AYWB_t26 | - | 19 Cys tRNA |
578590 | 578664 | + | 75 | 85057280 | AYWB_t27 | - | 20 Trp tRNA |
578685 | 578766 | + | 82 | 85057280 | AYWB_t28 | - | 15 Leu tRNA |
578817 | 578891 | + | 75 | 85057280 | AYWB_t29 | - | 05 Gln tRNA |
578979 | 579054 | + | 76 | 85057280 | AYWB_t30 | - | 09 His tRNA |
579404 | 579492 | + | 89 | 85057280 | AYWB_t31 | - | 08 Ser tRNA |