Геном прокариот/Материалы:NC 008054
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Базовый уровень статей |
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LOCUS NC_008054 1864998 bp DNA circular BCT 13-JUN-2006
DEFINITION Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete
genome.
ACCESSION NC_008054
VERSION NC_008054.1 GI:104773257
KEYWORDS complete genome; PRO.
SOURCE Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
ORGANISM Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae;
Lactobacillus.
REFERENCE 1 (bases 1 to 1864998)
AUTHORS van de Guchte,M., Penaud,S., Grimaldi,C., Barbe,V., Bryson,K.,
Nicolas,P., Robert,C., Oztas,S., Mangenot,S., Couloux,A., Loux,V.,
Dervyn,R., Bossy,R., Bolotin,A., Batto,J.M., Walunas,T.,
Gibrat,J.F., Bessieres,P., Weissenbach,J., Ehrlich,S.D. and
Maguin,E.
TITLE The complete genome sequence of Lactobacillus bulgaricus reveals
extensive and ongoing reductive evolution
JOURNAL (er) Proc. Natl. Acad. Sci. U.S.A. (2006) In press
PUBMED 16754859
REFERENCE 2 (bases 1 to 1864998)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (31-MAY-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1864998)
AUTHORS van de Guchte,M., Penaud,S., Grimaldi,C., Barbe,V., Bryson,K.,
Nicolas,P., Robert,C., Oztas,S., Mangenot,S., Couloux,A., Loux,V.,
Dervyn,R., Bossy,R., Bolotin,A., Batto,J.M., Walunas,T.,
Gibrat,J.-F., Bessieres,P., Weissenbach,J., Ehrlich,S.D. and
Maguin,E.
CONSRTM 1:Genoscope, 91057 Evry Cedex, FRANCE. 2:Unite Genetique
Microbienne, I.N.R.A, Domaine de vilvert, Jouy-en-Josas 78350,
FRANCE. 3:Unite Mathematique, Informatique et Genome, I.N.R.A,
Domaine de vilvert, Jouy-en-Josas 78350, FRANCE. 4:Integrated
Genomics Inc., Chicago, IL 60612, USA
TITLE Direct Submission
JOURNAL Submitted (28-APR-2005) Genoscope - Centre National de Sequencage :
BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
- Web : www.genoscope.cns.fr)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CR954253.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 19585 | 19657 | + | 73 | 104773257 | Ldb0018 | - | Anticodon: AGT |
| 30186 | 30258 | + | 73 | 104773257 | Ldb0034 | - | Anticodon: AGT |
| 45160 | 46720 | + | 1561 | 104773257 | Ldb0054 | - | 16S ribosomal RNA |
| 46947 | 49791 | + | 2845 | 104773257 | Ldb0055 | - | 23S ribosomal RNA |
| 49914 | 50030 | + | 117 | 104773257 | Ldb0056 | - | 5S ribosomal RNA |
| 111500 | 111575 | - | 76 | 104773257 | Ldb0134 | - | Anticodon: CTT |
| 220785 | 220857 | + | 73 | 104773257 | Ldb0257 | - | Anticodon: GGT |
| 284530 | 284600 | - | 71 | 104773257 | Ldb0337 | - | Anticodon: CCC |
| 330508 | 330579 | + | 72 | 104773257 | Ldb0379 | - | Anticodon: GCC |
| 330584 | 330657 | + | 74 | 104773257 | Ldb0380 | - | Anticodon: CGG |
| 330766 | 330840 | + | 75 | 104773257 | Ldb0381 | - | Anticodon: GCC |
| 369946 | 370017 | + | 72 | 104773257 | Ldb0439 | - | Anticodon: TTG |
| 372931 | 373012 | + | 82 | 104773257 | Ldb0443 | - | Anticodon: GTA |
| 373018 | 373089 | + | 72 | 104773257 | Ldb0444 | - | Anticodon: TTG |
| 388389 | 388477 | + | 89 | 104773257 | Ldb0462 | - | Anticodon: AAG |
| 459900 | 459974 | + | 75 | 104773257 | Ldb0543 | - | Anticodon: CCT |
| 539162 | 539236 | - | 75 | 104773257 | Ldb0633 | - | Anticodon: CCG |
| 590644 | 590716 | - | 73 | 104773257 | Ldb0695 | - | Anticodon: CTG |
| 590722 | 590793 | - | 72 | 104773257 | Ldb0696 | - | Anticodon: CTC |
| 689136 | 690696 | + | 1561 | 104773257 | Ldb0798 | - | 16S ribosomal RNA |
| 690807 | 690880 | + | 74 | 104773257 | Ldb0799 | - | Anticodon: GAT |
| 690950 | 691022 | + | 73 | 104773257 | Ldb0800 | - | Anticodon: TGC |
| 691162 | 694006 | + | 2845 | 104773257 | Ldb0801 | - | 23S ribosomal RNA |
| 694129 | 694245 | + | 117 | 104773257 | Ldb0802 | - | 5S ribosomal RNA |
| 753810 | 753898 | - | 89 | 104773257 | Ldb0866 | - | Anticodon: CGA |
| 799318 | 799401 | + | 84 | 104773257 | Ldb0912 | - | Anticodon: CAG |
| 806393 | 807953 | + | 1561 | 104773257 | Ldb0927 | - | 16S ribosomal RNA |
| 808180 | 811024 | + | 2845 | 104773257 | Ldb0928 | - | 23S ribosomal RNA |
| 811147 | 811263 | + | 117 | 104773257 | Ldb0929 | - | 5S ribosomal RNA |
| 814371 | 814443 | + | 73 | 104773257 | Ldb0933 | - | Anticodon: GTT |
| 814447 | 814520 | + | 74 | 104773257 | Ldb0934 | - | Anticodon: TGG |
| 814545 | 814616 | + | 72 | 104773257 | Ldb0935 | - | Anticodon: GCC |
| 814647 | 814720 | + | 74 | 104773257 | Ldb0936 | - | Anticodon: ACG |
| 814723 | 814795 | + | 73 | 104773257 | Ldb0937 | - | Anticodon: TAC |
| 814799 | 814870 | + | 72 | 104773257 | Ldb0938 | - | Anticodon: TTC |
| 814913 | 815000 | + | 88 | 104773257 | Ldb0939 | - | Anticodon: TGA |
| 815010 | 815083 | + | 74 | 104773257 | Ldb0940 | - | Anticodon: CAT |
| 815087 | 815160 | + | 74 | 104773257 | Ldb0941 | - | Anticodon: GTC |
| 815167 | 815239 | + | 73 | 104773257 | Ldb0942 | - | Anticodon: GAA |
| 815248 | 815329 | + | 82 | 104773257 | Ldb0943 | - | Anticodon: GTA |
| 815334 | 815404 | + | 71 | 104773257 | Ldb0944 | - | Anticodon: CCA |
| 815418 | 815493 | + | 76 | 104773257 | Ldb0945 | - | Anticodon: GTG |
| 815520 | 815590 | + | 71 | 104773257 | Ldb0946 | - | Anticodon: GCA |
| 815619 | 815703 | + | 85 | 104773257 | Ldb0947 | - | Anticodon: CAA |
| 1070383 | 1070454 | - | 72 | 104773257 | Ldb1265 | - | Anticodon: TTG |
| 1252433 | 1252506 | - | 74 | 104773257 | Ldb1454 | - | Anticodon: TCT |
| 1340511 | 1340594 | + | 84 | 104773257 | Ldb1556 | - | Anticodon: CAG |
| 1355840 | 1355912 | - | 73 | 104773257 | Ldb1576 | - | Anticodon: TAC |
| 1355916 | 1355987 | - | 72 | 104773257 | Ldb1577 | - | Anticodon: TTC |
| 1356126 | 1356199 | - | 74 | 104773257 | Ldb1578 | - | Anticodon: CAT |
| 1356206 | 1356296 | - | 91 | 104773257 | Ldb1579 | - | Anticodon: GGA |
| 1356305 | 1356377 | - | 73 | 104773257 | Ldb1580 | - | Anticodon: GTT |
| 1356385 | 1356501 | - | 117 | 104773257 | Ldb1581 | - | 5S ribosomal RNA |
| 1356624 | 1359468 | - | 2845 | 104773257 | Ldb1582 | - | 23S ribosomal RNA |
| 1359608 | 1359680 | - | 73 | 104773257 | Ldb1583 | - | Anticodon: TGC |
| 1359750 | 1359823 | - | 74 | 104773257 | Ldb1584 | - | Anticodon: GAT |
| 1359934 | 1361495 | - | 1562 | 104773257 | Ldb1585 | - | 16S ribosomal RNA |
| 1466822 | 1466898 | - | 77 | 104773257 | Ldb1716 | - | Anticodon: GTC |
| 1466925 | 1466996 | - | 72 | 104773257 | Ldb1717 | - | Anticodon: TTC |
| 1467000 | 1467072 | - | 73 | 104773257 | Ldb1718 | - | Anticodon: TAC |
| 1467075 | 1467148 | - | 74 | 104773257 | Ldb1719 | - | Anticodon: ACG |
| 1467184 | 1467255 | - | 72 | 104773257 | Ldb1720 | - | Anticodon: GCC |
| 1467292 | 1467408 | - | 117 | 104773257 | Ldb1721 | - | 5S ribosomal RNA |
| 1467531 | 1470375 | - | 2845 | 104773257 | Ldb1722 | - | 23S ribosomal RNA |
| 1470602 | 1472162 | - | 1561 | 104773257 | Ldb1723 | - | 16S ribosomal RNA |
| 1496262 | 1496334 | - | 73 | 104773257 | Ldb1756 | - | Anticodon: CTT |
| 1496369 | 1496441 | - | 73 | 104773257 | Ldb1757 | - | Anticodon: CTT |
| 1496475 | 1496547 | - | 73 | 104773257 | Ldb1758 | - | Anticodon: CTT |
| 1496581 | 1496653 | - | 73 | 104773257 | Ldb1759 | - | Anticodon: CTT |
| 1499401 | 1499473 | - | 73 | 104773257 | Ldb1762 | - | Anticodon: TAC |
| 1499477 | 1499548 | - | 72 | 104773257 | Ldb1763 | - | Anticodon: TTC |
| 1499700 | 1499788 | + | 89 | 104773257 | Ldb1764 | - | Anticodon: AAG |
| 1517703 | 1517775 | - | 73 | 104773257 | Ldb1783 | - | Anticodon: CGT |
| 1536473 | 1536560 | - | 88 | 104773257 | Ldb1807 | - | Anticodon: GCT |
| 1539987 | 1540103 | - | 117 | 104773257 | Ldb1811 | - | 5S ribosomal RNA |
| 1540225 | 1543069 | - | 2845 | 104773257 | Ldb1812 | - | 23S ribosomal RNA |
| 1543296 | 1544856 | - | 1561 | 104773257 | Ldb1813 | - | 16S ribosomal RNA |
| 1565834 | 1565918 | - | 85 | 104773257 | Ldb1839 | - | Anticodon: CAA |
| 1565936 | 1566020 | - | 85 | 104773257 | Ldb1840 | - | Anticodon: CAA |
| 1566049 | 1566119 | - | 71 | 104773257 | Ldb1841 | - | Anticodon: GCA |
| 1566146 | 1566221 | - | 76 | 104773257 | Ldb1842 | - | Anticodon: GTG |
| 1566235 | 1566305 | - | 71 | 104773257 | Ldb1843 | - | Anticodon: CCA |
| 1566310 | 1566391 | - | 82 | 104773257 | Ldb1844 | - | Anticodon: GTA |
| 1566400 | 1566472 | - | 73 | 104773257 | Ldb1845 | - | Anticodon: GAA |
| 1566479 | 1566552 | - | 74 | 104773257 | Ldb1846 | - | Anticodon: GTC |
| 1566556 | 1566629 | - | 74 | 104773257 | Ldb1847 | - | Anticodon: CAT |
| 1566639 | 1566726 | - | 88 | 104773257 | Ldb1848 | - | Anticodon: TGA |
| 1566769 | 1566840 | - | 72 | 104773257 | Ldb1849 | - | Anticodon: TTC |
| 1567099 | 1567189 | - | 91 | 104773257 | Ldb1850 | - | Anticodon: GCT |
| 1567192 | 1567265 | - | 74 | 104773257 | Ldb1851 | - | Anticodon: GAT |
| 1567269 | 1567339 | - | 71 | 104773257 | Ldb1852 | - | Anticodon: TCC |
| 1567354 | 1567426 | - | 73 | 104773257 | Ldb1853 | - | Anticodon: GAA |
| 1567444 | 1567517 | - | 74 | 104773257 | Ldb1854 | - | Anticodon: CAT |
| 1567529 | 1567602 | - | 74 | 104773257 | Ldb1855 | - | Anticodon: CAT |
| 1567615 | 1567688 | - | 74 | 104773257 | Ldb1856 | - | Anticodon: CAT |
| 1567725 | 1567798 | - | 74 | 104773257 | Ldb1857 | - | Anticodon: TGG |
| 1567805 | 1567878 | - | 74 | 104773257 | Ldb1858 | - | Anticodon: ACG |
| 1567884 | 1567969 | - | 86 | 104773257 | Ldb1859 | - | Anticodon: TAA |
| 1567985 | 1568056 | - | 72 | 104773257 | Ldb1860 | - | Anticodon: GCC |
| 1568061 | 1568133 | - | 73 | 104773257 | Ldb1861 | - | Anticodon: TGT |
| 1568145 | 1568226 | - | 82 | 104773257 | Ldb1862 | - | Anticodon: TAG |
| 1568239 | 1568311 | - | 73 | 104773257 | Ldb1863 | - | Anticodon: TTT |
| 1568314 | 1568386 | - | 73 | 104773257 | Ldb1864 | - | Anticodon: TAC |
| 1573404 | 1573520 | - | 117 | 104773257 | Ldb1875 | - | 5S ribosomal RNA |
| 1573643 | 1576487 | - | 2845 | 104773257 | Ldb1876 | - | 23S ribosomal RNA |
| 1576627 | 1576699 | - | 73 | 104773257 | Ldb1877 | - | Anticodon: TGC |
| 1576769 | 1576842 | - | 74 | 104773257 | Ldb1878 | - | Anticodon: GAT |
| 1576953 | 1578513 | - | 1561 | 104773257 | Ldb1879 | - | 16S ribosomal RNA |
| 1783750 | 1783866 | - | 117 | 104773257 | Ldb2124 | - | 5S ribosomal RNA |
| 1783988 | 1786832 | - | 2845 | 104773257 | Ldb2125 | - | 23S ribosomal RNA |
| 1787059 | 1788619 | - | 1561 | 104773257 | Ldb2126 | - | 16S ribosomal RNA |
| 1790587 | 1790660 | - | 74 | 104773257 | Ldb2130 | - | Anticodon: GTC |
| 1790664 | 1790736 | - | 73 | 104773257 | Ldb2131 | - | Anticodon: TAC |
| 1790739 | 1790812 | - | 74 | 104773257 | Ldb2132 | - | Anticodon: ACG |
| 1790848 | 1790919 | - | 72 | 104773257 | Ldb2133 | - | Anticodon: GCC |
| 1790939 | 1791012 | - | 74 | 104773257 | Ldb2134 | - | Anticodon: TGG |
| 1791016 | 1791088 | - | 73 | 104773257 | Ldb2135 | - | Anticodon: GTT |
| 1791096 | 1791212 | - | 117 | 104773257 | Ldb2136 | - | 5S ribosomal RNA |
| 1791335 | 1794179 | - | 2845 | 104773257 | Ldb2137 | - | 23S ribosomal RNA |
| 1794320 | 1794392 | - | 73 | 104773257 | Ldb2138 | - | Anticodon: TGC |
| 1794462 | 1794535 | - | 74 | 104773257 | Ldb2139 | - | Anticodon: GAT |
| 1794646 | 1796206 | - | 1561 | 104773257 | Ldb2140 | - | 16S ribosomal RNA |