Геном прокариот/Материалы:NC 008319
Внешний вид
Базовый уровень статей | |
LOCUS NC_008319 2606748 bp DNA circular BCT 05-SEP-2006 DEFINITION Synechococcus sp. CC9311, complete genome. ACCESSION NC_008319 VERSION NC_008319.1 GI:113952711 KEYWORDS . SOURCE Synechococcus sp. CC9311 ORGANISM Synechococcus sp. CC9311 Bacteria; Cyanobacteria; Chroococcales; Synechococcus. REFERENCE 1 (bases 1 to 2606748) AUTHORS Palenik,B., Ren,Q., Dupont,C.L., Myers,G.S., Heidelberg,J.F., Badger,J.H., Madupu,R., Nelson,W.C., Brinkac,L.M., Dodson,R.J., Durkin,A.S., Daugherty,S.C., Sullivan,S.A., Khouri,H., Mohamoud,Y., Halpin,R. and Paulsen,I.T. TITLE Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment JOURNAL (er) Proc. Natl. Acad. Sci. U.S.A. (2006) In press PUBMED 16938853 REFERENCE 2 (bases 1 to 2606748) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2606748) AUTHORS Palenik,B., Ren,Q., Dupont,C.L., Myers,G.S., Heidelberg,J.F., Badger,J.H., Madupu,R., Nelson,W.C., Brinkac,L.M., Dodson,R.J., Durkin,A.S., Daugherty,S.C., Sullivan,S.A., Khouri,H.M., Mohamoud,Y., Halpin,R. and Paulsen,I.T. TITLE Direct Submission JOURNAL Submitted (04-AUG-2006) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000435. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
45490 | 45561 | - | 72 | 113952711 | sync_0044 | - | 01 Gly tRNA |
87169 | 87240 | + | 72 | 113952711 | sync_0082 | - | 01 Gly tRNA |
208369 | 208442 | + | 74 | 113952711 | sync_0201 | - | 11 Arg tRNA |
288447 | 288519 | + | 73 | 113952711 | sync_0278 | - | Xaa tRNA |
308668 | 308741 | + | 74 | 113952711 | sync_0299 | - | 11 Arg tRNA |
344293 | 344374 | + | 82 | 113952711 | sync_0335 | - | 15 Leu tRNA |
354855 | 354927 | - | 73 | 113952711 | sync_0350 | - | 02 Ala tRNA |
398746 | 398819 | + | 74 | 113952711 | sync_0390 | - | 03 Pro tRNA |
417315 | 417403 | - | 89 | 113952711 | sync_0405 | - | 08 Ser tRNA |
439501 | 439572 | + | 72 | 113952711 | sync_0441 | - | 05 Gln tRNA |
454675 | 454751 | + | 77 | 113952711 | sync_0458 | - | 11 Arg tRNA |
470642 | 470712 | + | 71 | 113952711 | sync_0474 | - | 19 Cys tRNA |
508476 | 508548 | - | 73 | 113952711 | sync_0524 | - | 17 Phe tRNA |
521701 | 521775 | - | 75 | 113952711 | sync_0542 | - | 12 Thr tRNA |
529961 | 531437 | + | 1477 | 113952711 | sync_0553 | - | 16S ribosomal RNA |
531624 | 531697 | + | 74 | 113952711 | sync_0554 | - | 14 Ile tRNA |
531707 | 531779 | + | 73 | 113952711 | sync_0555 | - | 02 Ala tRNA |
532200 | 535063 | + | 2864 | 113952711 | sync_0556 | - | 23S ribosomal RNA |
535179 | 535295 | + | 117 | 113952711 | sync_0557 | - | 5S ribosomal RNA |
554168 | 554242 | - | 75 | 113952711 | sync_0576 | - | 12 Thr tRNA |
554253 | 554334 | - | 82 | 113952711 | sync_0577 | - | 18 Tyr tRNA |
673778 | 673864 | + | 87 | 113952711 | sync_0719 | - | 08 Ser tRNA |
691679 | 691751 | - | 73 | 113952711 | sync_0738 | - | 09 His tRNA |
698137 | 698218 | - | 82 | 113952711 | sync_0745 | - | 15 Leu tRNA |
699751 | 699832 | + | 82 | 113952711 | sync_0747 | - | 15 Leu tRNA |
768454 | 768526 | + | 73 | 113952711 | sync_0832 | - | 02 Ala tRNA |
907494 | 907566 | - | 73 | 113952711 | sync_1005 | - | 04 Glu tRNA |
1026731 | 1026804 | - | 74 | 113952711 | sync_1131 | - | 03 Pro tRNA |
1028873 | 1028944 | - | 72 | 113952711 | sync_1135 | - | 10 Lys tRNA |
1078857 | 1078933 | - | 77 | 113952711 | sync_1199 | - | 16 Met tRNA |
1143399 | 1143485 | - | 87 | 113952711 | sync_1264 | - | 08 Ser tRNA |
1203943 | 1204016 | - | 74 | 113952711 | sync_1324 | - | 16 Met tRNA |
1274383 | 1274469 | - | 87 | 113952711 | sync_1393 | - | 08 Ser tRNA |
1304108 | 1304316 | - | 209 | 113952711 | sync_1427 | - | 6S RNA sequence |
1506397 | 1506470 | + | 74 | 113952711 | sync_1643 | - | 03 Pro tRNA |
1702995 | 1703080 | + | 86 | 113952711 | sync_1913 | - | 15 Leu tRNA |
1846185 | 1846258 | - | 74 | 113952711 | sync_2083 | - | 11 Arg tRNA |
1900882 | 1900953 | - | 72 | 113952711 | sync_2145 | - | 13 Val tRNA |
1915633 | 1915706 | - | 74 | 113952711 | sync_2164 | - | 06 Asp tRNA |
1916236 | 1916308 | - | 73 | 113952711 | sync_2167 | - | 20 Trp tRNA |
1930338 | 1930408 | - | 71 | 113952711 | sync_2194 | - | 01 Gly tRNA |
1984730 | 1984801 | + | 72 | 113952711 | sync_2259 | - | 13 Val tRNA |
2087350 | 2087422 | + | 73 | 113952711 | sync_2376 | - | 12 Thr tRNA |
2143555 | 2143817 | - | 263 | 113952711 | sync_2449 | - | sRNA |
2154043 | 2154127 | - | 85 | 113952711 | sync_2458 | - | 15 Leu tRNA |
2219662 | 2219778 | - | 117 | 113952711 | sync_2535 | - | 5S ribosomal RNA |
2219894 | 2222757 | - | 2864 | 113952711 | sync_2536 | - | 23S ribosomal RNA |
2223178 | 2223250 | - | 73 | 113952711 | sync_2537 | - | 02 Ala tRNA |
2223260 | 2223333 | - | 74 | 113952711 | sync_2538 | - | 14 Ile tRNA |
2223520 | 2224996 | - | 1477 | 113952711 | sync_2539 | - | 16S ribosomal RNA |
2269768 | 2269839 | + | 72 | 113952711 | sync_2589 | - | 07 Asn tRNA |
2498375 | 2498446 | - | 72 | 113952711 | sync_2844 | - | 13 Val tRNA |