Геном прокариот/Материалы:NC 008702
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Базовый уровень статей |
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LOCUS NC_008702 4376040 bp DNA circular BCT 08-AUG-2007
DEFINITION Azoarcus sp. BH72, complete genome.
ACCESSION NC_008702
VERSION NC_008702.1 GI:119896292
KEYWORDS complete genome.
SOURCE Azoarcus sp. BH72
ORGANISM Azoarcus sp. BH72
Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
Rhodocyclaceae; Azoarcus.
REFERENCE 1 (bases 1 to 4376040)
AUTHORS Krause,A., Ramakumar,A., Bartels,D., Battistoni,F., Bekel,T.,
Boch,J., Bohm,M., Friedrich,F., Hurek,T., Krause,L., Linke,B.,
McHardy,A.C., Sarkar,A., Schneiker,S., Syed,A.A., Thauer,R.,
Vorholter,F.J., Weidner,S., Puhler,A., Reinhold-Hurek,B., Kaiser,O.
and Goesmann,A.
TITLE Complete genome of the mutualistic, N2-fixing grass endophyte
Azoarcus sp. strain BH72
JOURNAL Nat. Biotechnol. 24 (11), 1385-1391 (2006)
PUBMED 17057704
REFERENCE 2 (bases 1 to 4376040)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4376040)
AUTHORS Reinhold-Hurek,B. and Krause,A.
TITLE Direct Submission
JOURNAL Submitted (19-SEP-2006) Reinhold-Hurek B., Krause A., University of
Bremen, General Microbiology, PO. Box 33 04 40, D-28334 Bremen,
GERMANY
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM406670.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 204448 | 204524 | + | 77 | 119896292 | azo_tRNA_0001 | - | Anticodon: CCG |
| 204806 | 206339 | + | 1534 | 119896292 | azo_rrn1 | - | 16S ribosomal RNA |
| 206413 | 206489 | + | 77 | 119896292 | azo_tRNA_0002 | - | Anticodon: GAT |
| 206517 | 206592 | + | 76 | 119896292 | azo_tRNA_0003 | - | Anticodon: TGC |
| 206857 | 209743 | + | 2887 | 119896292 | azo_rrn2 | - | 23S ribosomal RNA |
| 209845 | 209962 | + | 118 | 119896292 | azo_rrn2a | - | 5S ribosomal RNA |
| 438216 | 438288 | - | 73 | 119896292 | azo_tRNA_0004 | - | Anticodon: TTT |
| 601691 | 601766 | - | 76 | 119896292 | azo_tRNA_0005 | - | Anticodon: CTT |
| 770728 | 772261 | + | 1534 | 119896292 | azo_rrn7 | - | 16S ribosomal RNA |
| 772335 | 772411 | + | 77 | 119896292 | azo_tRNA_0006 | - | Anticodon: GAT |
| 772439 | 772514 | + | 76 | 119896292 | azo_tRNA_0007 | - | Anticodon: TGC |
| 772779 | 775665 | + | 2887 | 119896292 | azo_rrn8 | - | 23S ribosomal RNA |
| 775767 | 775884 | + | 118 | 119896292 | azo_rrn8a | - | 5S ribosomal RNA |
| 807603 | 807679 | - | 77 | 119896292 | azo_tRNA_0008 | - | Anticodon: TTG |
| 832451 | 832527 | - | 77 | 119896292 | azo_tRNA_0009 | - | Anticodon: CAT |
| 973414 | 973498 | + | 85 | 119896292 | azo_tRNA_0010 | - | Anticodon: CAA |
| 1005095 | 1005179 | - | 85 | 119896292 | azo_tRNA_0011 | - | Anticodon: CAG |
| 1005353 | 1005437 | - | 85 | 119896292 | azo_tRNA_0012 | - | Anticodon: CAG |
| 1052967 | 1053042 | + | 76 | 119896292 | azo_tRNA_0013 | - | Anticodon: GAA |
| 1091451 | 1091527 | + | 77 | 119896292 | azo_tRNA_0014 | - | Anticodon: CGG |
| 1104890 | 1104965 | + | 76 | 119896292 | azo_tRNA_0015 | - | Anticodon: GGC |
| 1104986 | 1105061 | + | 76 | 119896292 | azo_tRNA_0016 | - | Anticodon: TTC |
| 1105124 | 1105200 | + | 77 | 119896292 | azo_tRNA_0017 | - | Anticodon: GTC |
| 1105287 | 1105362 | + | 76 | 119896292 | azo_tRNA_0018 | - | Anticodon: GGC |
| 1105372 | 1105447 | + | 76 | 119896292 | azo_tRNA_0019 | - | Anticodon: TTC |
| 1105508 | 1105584 | + | 77 | 119896292 | azo_tRNA_0020 | - | Anticodon: GTC |
| 1162391 | 1162467 | + | 77 | 119896292 | azo_tRNA_0021 | - | Anticodon: GAC |
| 1170058 | 1170134 | + | 77 | 119896292 | azo_tRNA_0022 | - | Anticodon: GGG |
| 1184957 | 1185046 | + | 90 | 119896292 | azo_tRNA_0023 | - | Anticodon: TGA |
| 1283196 | 1283271 | + | 76 | 119896292 | azo_tRNA_0024 | - | Anticodon: CGT |
| 1391911 | 1393444 | + | 1534 | 119896292 | azo_rrn5 | - | 16S ribosomal RNA |
| 1393517 | 1393593 | + | 77 | 119896292 | azo_tRNA_0025 | - | Anticodon: GAT |
| 1393621 | 1393696 | + | 76 | 119896292 | azo_tRNA_0026 | - | Anticodon: TGC |
| 1393962 | 1396848 | + | 2887 | 119896292 | azo_rrn6 | - | 23S ribosomal RNA |
| 1396949 | 1397066 | + | 118 | 119896292 | azo_rrn6a | - | 5S ribosomal RNA |
| 1445319 | 1445408 | - | 90 | 119896292 | azo_tRNA_0027 | - | Anticodon: CGA |
| 1466272 | 1466348 | - | 77 | 119896292 | azo_tRNA_0028 | - | Anticodon: ACG |
| 1508492 | 1508567 | + | 76 | 119896292 | azo_tRNA_0029 | - | Anticodon: CGC |
| 1524791 | 1524875 | + | 85 | 119896292 | azo_tRNA_0030 | - | Anticodon: GAG |
| 1771974 | 1772049 | - | 76 | 119896292 | azo_tRNA_0031 | - | Anticodon: GTT |
| 1772115 | 1772190 | - | 76 | 119896292 | azo_tRNA_0032 | - | Anticodon: GTT |
| 1809899 | 1809974 | + | 76 | 119896292 | azo_tRNA_0033 | - | Anticodon: GCC |
| 1810049 | 1810122 | + | 74 | 119896292 | azo_tRNA_0034 | - | Anticodon: GCA |
| 1810132 | 1810207 | + | 76 | 119896292 | azo_tRNA_0035 | - | Anticodon: GCC |
| 1812221 | 1812305 | - | 85 | 119896292 | azo_tRNA_0036 | - | Anticodon: TAA |
| 2045941 | 2046025 | + | 85 | 119896292 | azo_tRNA_0037 | - | Anticodon: TAG |
| 2269150 | 2269224 | - | 75 | 119896292 | azo_tRNA_0038 | - | Anticodon: CAC |
| 2269263 | 2269337 | - | 75 | 119896292 | azo_tRNA_0039 | - | Anticodon: CAC |
| 2269418 | 2269493 | - | 76 | 119896292 | azo_tRNA_0040 | - | Anticodon: TAC |
| 2307999 | 2308074 | - | 76 | 119896292 | azo_tRNA_0041 | - | Anticodon: GTG |
| 2308120 | 2308196 | - | 77 | 119896292 | azo_tRNA_0042 | - | Anticodon: TCT |
| 2308224 | 2308300 | - | 77 | 119896292 | azo_tRNA_0043 | - | Anticodon: TGG |
| 2508773 | 2508863 | - | 91 | 119896292 | azo_tRNA_0044 | - | Anticodon: GGA |
| 2869372 | 2869448 | - | 77 | 119896292 | azo_tRNA_0045 | - | Anticodon: CAT |
| 2959702 | 2960079 | - | 378 | 119896292 | azo_rRNA_0001 | - | tmRNA |
| 2962600 | 2962675 | - | 76 | 119896292 | azo_tRNA_0046 | - | Anticodon: TGT |
| 3423041 | 3423134 | - | 94 | 119896292 | azo_tRNA_0047 | - | Anticodon: GCT |
| 3499971 | 3500045 | + | 75 | 119896292 | azo_tRNA_0048 | - | Anticodon: CCT |
| 3511781 | 3511898 | - | 118 | 119896292 | azo3194a | - | 5S ribosomal RNA |
| 3511974 | 3514860 | - | 2887 | 119896292 | azo_rrn4 | - | 23S ribosomal RNA |
| 3515151 | 3515226 | - | 76 | 119896292 | azo_tRNA_0049 | - | Anticodon: TGC |
| 3515254 | 3515330 | - | 77 | 119896292 | azo_tRNA_0050 | - | Anticodon: GAT |
| 3515378 | 3516911 | - | 1534 | 119896292 | azo_rrn3 | - | 16S ribosomal RNA |
| 3559218 | 3559256 | + | 39 | 119896292 | azo_tRNA_0051 | - | 14 Ile tRNA |
| 3559462 | 3559501 | + | 40 | 119896292 | azo_tRNA_0051 | - | 14 Ile tRNA |
| 3759284 | 3759359 | - | 76 | 119896292 | azo_tRNA_0052 | - | Anticodon: CCA |
| 3760686 | 3760760 | - | 75 | 119896292 | azo_tRNA_0053 | - | Anticodon: GGT |
| 3760782 | 3760855 | - | 74 | 119896292 | azo_tRNA_0054 | - | Anticodon: TCC |
| 3760941 | 3761025 | - | 85 | 119896292 | azo_tRNA_0055 | - | Anticodon: GTA |
| 4144876 | 4144950 | + | 75 | 119896292 | azo_tRNA_0056 | - | Anticodon: CCC |