Геном прокариот/Материалы:NC 009004
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Базовый уровень статей |
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LOCUS NC_009004 2529478 bp DNA circular BCT 09-AUG-2007
DEFINITION Lactococcus lactis subsp. cremoris MG1363, complete genome.
ACCESSION NC_009004
VERSION NC_009004.1 GI:125622882
KEYWORDS complete genome.
SOURCE Lactococcus lactis subsp. cremoris MG1363
ORGANISM Lactococcus lactis subsp. cremoris MG1363
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
Lactococcus.
REFERENCE 1 (bases 1 to 2529478)
AUTHORS Wegmann,U., O'connell-Motherway,M., Zomer,A., Buist,G.,
Shearman,C., Canchaya,C., Ventura,M., Goesmann,A., Gasson,M.J.,
Kuipers,O.P., van Sinderen,D. and Kok,J.
TITLE Complete Genome Sequence of the Prototype Lactic Acid Bacterium
Lactococcus lactis subsp. cremoris MG1363
JOURNAL J. Bacteriol. 189 (8), 3256-3270 (2007)
PUBMED 17307855
REFERENCE 2 (bases 1 to 2529478)
AUTHORS Wegmann,U. and Linke,B.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2006) Wegmann, U., Institute of Food Research,
Food Safety Science Division Norwich Research Park, Colney, Norwich
NR4 7UA, England Linke, B., Center for Biotechnology, Bielefeld
University Universitaetsstrasse 25, 33615 Bielefeld, GERMANY
REFERENCE 3 (bases 1 to 2529478)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-APR-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM406671.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 25648 | 25719 | + | 72 | 125622882 | llmg_tRNA_01 | - | Anticodon: TTC |
| 25725 | 25814 | + | 90 | 125622882 | llmg_tRNA_02 | - | Anticodon: TGA |
| 25825 | 25898 | + | 74 | 125622882 | llmg_tRNA_03 | - | Anticodon: CAT |
| 25904 | 25976 | + | 73 | 125622882 | llmg_tRNA_04 | - | Anticodon: GAA |
| 25988 | 26058 | + | 71 | 125622882 | llmg_tRNA_05 | - | Anticodon: TCC |
| 26073 | 26146 | + | 74 | 125622882 | llmg_tRNA_06 | - | Anticodon: GAT |
| 26149 | 26264 | + | 116 | 125622882 | llmg_tRNA_06a | - | 5S ribosomal RNA |
| 26271 | 26344 | + | 74 | 125622882 | llmg_tRNA_07 | - | Anticodon: GTT |
| 60653 | 60725 | + | 73 | 125622882 | llmg_tRNA_08 | - | Anticodon: CTT |
| 123801 | 123889 | - | 89 | 125622882 | llmg_tRNA_09 | - | Anticodon: AAG |
| 133800 | 133886 | - | 87 | 125622882 | llmg_tRNA_10 | - | Anticodon: CGA |
| 154602 | 154677 | - | 76 | 125622882 | llmg_tRNA_11 | - | Anticodon: CGT |
| 252907 | 252995 | - | 89 | 125622882 | llmg_tRNA_12 | - | Anticodon: AAG |
| 275886 | 275973 | - | 88 | 125622882 | llmg_tRNA_13 | - | Anticodon: GGA |
| 283053 | 283126 | + | 74 | 125622882 | llmg_tRNA_14 | - | 11 Arg tRNA |
| 283312 | 283385 | + | 74 | 125622882 | llmg_tRNA_15 | - | Anticodon: TGG |
| 433860 | 433930 | + | 71 | 125622882 | llmg_tRNA_16 | - | Anticodon: GCA |
| 456744 | 456817 | + | 74 | 125622882 | llmg_tRNA_17 | - | Anticodon: TCT |
| 511423 | 512971 | + | 1549 | 125622882 | llmg_rRNA_1 | - | 16S ribosomal RNA |
| 513063 | 513135 | + | 73 | 125622882 | llmg_tRNA_18 | - | Anticodon: TGC |
| 513274 | 516175 | + | 2902 | 125622882 | llmg_rRNA_2 | - | 23S ribosomal RNA |
| 516258 | 516373 | + | 116 | 125622882 | llmg_rRNA_2a | - | 5S ribosomal RNA |
| 516376 | 516448 | + | 73 | 125622882 | llmg_tRNA_19 | - | Anticodon: TAC |
| 516478 | 516550 | + | 73 | 125622882 | llmg_tRNA_20 | - | Anticodon: GTC |
| 516568 | 516640 | + | 73 | 125622882 | llmg_tRNA_21 | - | Anticodon: TTT |
| 516650 | 516731 | + | 82 | 125622882 | llmg_tRNA_22 | - | Anticodon: TAG |
| 516745 | 516817 | + | 73 | 125622882 | llmg_tRNA_23 | - | Anticodon: TGT |
| 516843 | 516914 | + | 72 | 125622882 | llmg_tRNA_24 | - | Anticodon: GCC |
| 516953 | 517026 | + | 74 | 125622882 | llmg_tRNA_25 | - | Anticodon: ACG |
| 517032 | 517105 | + | 74 | 125622882 | llmg_tRNA_26 | - | Anticodon: TGG |
| 517143 | 517216 | + | 74 | 125622882 | llmg_tRNA_27 | - | Anticodon: CAT |
| 517229 | 517302 | + | 74 | 125622882 | llmg_tRNA_28 | - | Anticodon: CAT |
| 517310 | 517382 | + | 73 | 125622882 | llmg_tRNA_29 | - | Anticodon: GAA |
| 517393 | 517463 | + | 71 | 125622882 | llmg_tRNA_30 | - | Anticodon: TCC |
| 517489 | 517562 | + | 74 | 125622882 | llmg_tRNA_31 | - | Anticodon: GAT |
| 517605 | 517692 | + | 88 | 125622882 | llmg_tRNA_32 | - | Anticodon: GCT |
| 583292 | 583363 | + | 72 | 125622882 | llmg_tRNA_33 | - | Anticodon: CCG |
| 591544 | 591619 | + | 76 | 125622882 | llmg_tRNA_34 | - | Anticodon: TTT |
| 749856 | 749928 | - | 73 | 125622882 | llmg_tRNA_35 | - | Anticodon: CCT |
| 770595 | 770666 | + | 72 | 125622882 | llmg_tRNA_36 | - | Anticodon: TTG |
| 869644 | 869733 | + | 90 | 125622882 | llmg_tRNA_37 | - | Anticodon: TGA |
| 1226392 | 1226465 | + | 74 | 125622882 | llmg_tRNA_38 | - | Anticodon: CAT |
| 1827876 | 1827949 | - | 74 | 125622882 | llmg_tRNA_39 | - | Anticodon: CAT |
| 2089171 | 2089241 | - | 71 | 125622882 | llmg_tRNA_40 | - | Anticodon: TTT |
| 2130238 | 2130323 | - | 86 | 125622882 | llmg_tRNA_41 | - | Anticodon: TAA |
| 2130358 | 2130429 | - | 72 | 125622882 | llmg_tRNA_42 | - | Anticodon: GCC |
| 2130455 | 2130527 | - | 73 | 125622882 | llmg_tRNA_43 | - | Anticodon: TGT |
| 2130541 | 2130622 | - | 82 | 125622882 | llmg_tRNA_44 | - | Anticodon: TAG |
| 2130632 | 2130704 | - | 73 | 125622882 | llmg_tRNA_45 | - | Anticodon: TTT |
| 2130722 | 2130794 | - | 73 | 125622882 | llmg_tRNA_46 | - | Anticodon: GTC |
| 2130824 | 2130896 | - | 73 | 125622882 | llmg_tRNA_47 | - | Anticodon: TAC |
| 2130899 | 2131014 | - | 116 | 125622882 | llmg_rRNA_48b | - | 5S ribosomal RNA |
| 2131097 | 2133998 | - | 2902 | 125622882 | llmg_rRNA_48c | - | 23S ribosomal RNA |
| 2134137 | 2134209 | - | 73 | 125622882 | llmg_tRNA_48 | - | Anticodon: TGC |
| 2134301 | 2135851 | - | 1551 | 125622882 | llmg_rRNA_48a | - | 16S ribosomal RNA |
| 2310690 | 2310762 | - | 73 | 125622882 | llmg_tRNA_49 | - | Anticodon: GGT |
| 2371489 | 2371604 | - | 116 | 125622882 | llmg_2426a | - | 5S ribosomal RNA |
| 2371687 | 2374588 | - | 2902 | 125622882 | llmg_rRNA_4 | - | 23S ribosomal RNA |
| 2374727 | 2374799 | - | 73 | 125622882 | llmg_tRNA_50 | - | Anticodon: TGC |
| 2374891 | 2376441 | - | 1551 | 125622882 | llmg_rRNA_4a | - | 16S ribosomal RNA |
| 2418858 | 2418973 | - | 116 | 125622882 | llmg_2466a | - | 5S ribosomal RNA |
| 2419056 | 2421957 | - | 2902 | 125622882 | llmg_rRNA_5 | - | 23S ribosomal RNA |
| 2422096 | 2422168 | - | 73 | 125622882 | llmg_tRNA_51 | - | Anticodon: TGC |
| 2422260 | 2423810 | - | 1551 | 125622882 | llmg_rRNA_5a | - | 16S ribosomal RNA |
| 2452228 | 2452310 | - | 83 | 125622882 | llmg_tRNA_52 | - | Anticodon: CAG |
| 2499667 | 2499750 | - | 84 | 125622882 | llmg_tRNA_53 | - | Anticodon: CAA |
| 2499763 | 2499834 | - | 72 | 125622882 | llmg_tRNA_54 | - | Anticodon: TTG |
| 2499844 | 2499916 | - | 73 | 125622882 | llmg_tRNA_55 | - | Anticodon: GTG |
| 2499928 | 2499998 | - | 71 | 125622882 | llmg_tRNA_56 | - | Anticodon: CCA |
| 2500015 | 2500095 | - | 81 | 125622882 | llmg_tRNA_57 | - | Anticodon: GTA |
| 2500131 | 2500203 | - | 73 | 125622882 | llmg_tRNA_58 | - | Anticodon: TAC |
| 2500206 | 2500321 | - | 116 | 125622882 | llmg_rRNA_6a | - | 5S ribosomal RNA |
| 2500404 | 2503305 | - | 2902 | 125622882 | llmg_rRNA_6 | - | 23S ribosomal RNA |
| 2503444 | 2503516 | - | 73 | 125622882 | llmg_tRNA_59 | - | Anticodon: TGC |
| 2503608 | 2505158 | - | 1551 | 125622882 | llmg_rRNA_6b | - | 16S ribosomal RNA |
| 2523520 | 2523593 | - | 74 | 125622882 | llmg_tRNA_60 | - | Anticodon: GTT |
| 2523630 | 2523701 | - | 72 | 125622882 | llmg_tRNA_61 | - | Anticodon: TTC |
| 2523711 | 2523826 | - | 116 | 125622882 | llmg_rRNA_60a | - | 5S ribosomal RNA |
| 2523909 | 2526810 | - | 2902 | 125622882 | llmg_rRNA_7 | - | 23S ribosomal RNA |
| 2526949 | 2527021 | - | 73 | 125622882 | llmg_tRNA_62 | - | Anticodon: TGC |
| 2527113 | 2528663 | - | 1551 | 125622882 | llmg_rRNA_7a | - | 16S ribosomal RNA |