Геном прокариот/Материалы:NC 009257
Внешний вид
Базовый уровень статей | |
LOCUS NC_009257 1898476 bp DNA circular BCT 31-MAR-2007 DEFINITION Francisella tularensis subsp. tularensis WY96-3418, complete genome. ACCESSION NC_009257 VERSION NC_009257.1 GI:134301169 KEYWORDS . SOURCE Francisella tularensis subsp. tularensis WY96-3418 ORGANISM Francisella tularensis subsp. tularensis WY96-3418 Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella. REFERENCE 1 (bases 1 to 1898476) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (30-MAR-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 2 (bases 1 to 1898476) AUTHORS Godbole,S., Auerbach,R.K., Beckstrom-Sternberg,S.M., Brown,N., Bruce,D., Deng,Z., Gilna,P., Keim,P.S., Kubota,K., Munk,A.C., Noronha,J., Peterson,J., Wagner,D.M., Wei,X., Wang,A., Wang,J., Zhou,Y., Scheuermann,R.H. and Brettin,T.S. CONSRTM BioHealthBase TITLE Direct Submission JOURNAL Submitted (08-MAR-2007) Department of Pathology, UT Southwestern Medical Center, 6000, Harry Hines Blvd., Dallas, TX 75390, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000608. The sequencing of Francisella tularensis subspecies tularensis WY96-3418 genome was performed at the JGI production genomics facility in Walnut Creek, CA. Genome finishing was performed by the JGI at Los Alamos National Laboratory, Los Alamos, NM. Annotation was performed at BioHealthBase, a Bioinformatics Resource Center supported by the NIH/NIAID. The sequencing was supported by Intelligence Technology Innovation Center. For further information about the source of the DNA, contact Tom Brettin (brettin@lanl.gov) or David Bruce (dbruce@lanl.gov). COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
55860 | 57388 | + | 1529 | 134301169 | FTW_2069 | - | 16S ribosomal RNA |
57484 | 57560 | + | 77 | 134301169 | FTW_2063 | - | 14 Ile tRNA |
57575 | 57650 | + | 76 | 134301169 | FTW_2043 | - | 02 Ala tRNA |
57702 | 60591 | + | 2890 | 134301169 | FTW_2066 | - | 23S ribosomal RNA |
60636 | 60750 | + | 115 | 134301169 | FTW_2073 | - | 5S ribosomal RNA |
133480 | 133556 | + | 77 | 134301169 | FTW_2053 | - | 16 Met tRNA |
169419 | 169504 | + | 86 | 134301169 | FTW_2029 | - | 15 Leu tRNA |
234188 | 234272 | + | 85 | 134301169 | FTW_2056 | - | 18 Tyr tRNA |
234274 | 234347 | + | 74 | 134301169 | FTW_2049 | - | 01 Gly tRNA |
234376 | 234451 | + | 76 | 134301169 | FTW_2060 | - | 12 Thr tRNA |
235700 | 235775 | + | 76 | 134301169 | FTW_2046 | - | 20 Trp tRNA |
274062 | 274137 | + | 76 | 134301169 | FTW_2040 | - | 11 Arg tRNA |
274479 | 274578 | - | 100 | 134301169 | FTW_2077 | - | SRP_bact |
277794 | 277870 | - | 77 | 134301169 | FTW_2055 | - | 16 Met tRNA |
357522 | 357598 | - | 77 | 134301169 | FTW_2054 | - | 16 Met tRNA |
438668 | 438754 | - | 87 | 134301169 | FTW_2032 | - | 15 Leu tRNA |
465685 | 465760 | - | 76 | 134301169 | FTW_2036 | - | 07 Asn tRNA |
473012 | 473086 | + | 75 | 134301169 | FTW_2050 | - | 01 Gly tRNA |
473102 | 473175 | + | 74 | 134301169 | FTW_2047 | - | 19 Cys tRNA |
473181 | 473269 | + | 89 | 134301169 | FTW_2030 | - | 15 Leu tRNA |
545573 | 547101 | + | 1529 | 134301169 | FTW_2070 | - | 16S ribosomal RNA |
547197 | 547273 | + | 77 | 134301169 | FTW_2064 | - | 14 Ile tRNA |
547288 | 547363 | + | 76 | 134301169 | FTW_2044 | - | 02 Ala tRNA |
547415 | 550304 | + | 2890 | 134301169 | FTW_2067 | - | 23S ribosomal RNA |
550349 | 550463 | + | 115 | 134301169 | FTW_2074 | - | 5S ribosomal RNA |
593915 | 593990 | + | 76 | 134301169 | FTW_2052 | - | 17 Phe tRNA |
594008 | 594084 | + | 77 | 134301169 | FTW_2062 | - | 03 Pro tRNA |
594093 | 594169 | + | 77 | 134301169 | FTW_2041 | - | 11 Arg tRNA |
594197 | 594272 | + | 76 | 134301169 | FTW_2035 | - | 09 His tRNA |
594279 | 594361 | + | 83 | 134301169 | FTW_2031 | - | 15 Leu tRNA |
647802 | 647889 | - | 88 | 134301169 | FTW_2039 | - | 08 Ser tRNA |
733777 | 733868 | + | 92 | 134301169 | FTW_2037 | - | 08 Ser tRNA |
733896 | 733971 | + | 76 | 134301169 | FTW_2057 | - | 13 Val tRNA |
735188 | 736716 | + | 1529 | 134301169 | FTW_2071 | - | 16S ribosomal RNA |
736812 | 736888 | + | 77 | 134301169 | FTW_2065 | - | 14 Ile tRNA |
736903 | 736978 | + | 76 | 134301169 | FTW_2045 | - | 02 Ala tRNA |
737030 | 739919 | + | 2890 | 134301169 | FTW_2068 | - | 23S ribosomal RNA |
739964 | 740078 | + | 115 | 134301169 | FTW_2075 | - | 5S ribosomal RNA |
759236 | 759525 | + | 290 | 134301169 | FTW_2079 | - | RNaseP_bact_a |
781872 | 781946 | - | 75 | 134301169 | FTW_2051 | - | 01 Gly tRNA |
781961 | 782037 | - | 77 | 134301169 | FTW_2042 | - | 11 Arg tRNA |
793525 | 793601 | - | 77 | 134301169 | FTW_2059 | - | 13 Val tRNA |
1256419 | 1256508 | - | 90 | 134301169 | FTW_2038 | - | 08 Ser tRNA |
1397114 | 1397189 | - | 76 | 134301169 | FTW_2028 | - | 10 Lys tRNA |
1446484 | 1446559 | - | 76 | 134301169 | FTW_2058 | - | 13 Val tRNA |
1583632 | 1583746 | - | 115 | 134301169 | FTW_2076 | - | 5S ribosomal RNA |
1665180 | 1665255 | - | 76 | 134301169 | FTW_2033 | - | 04 Glu tRNA |
1721224 | 1721298 | + | 75 | 134301169 | FTW_2034 | - | 05 Gln tRNA |
1825819 | 1825968 | - | 150 | 134301169 | FTW_2072 | - | RFN |
1828070 | 1828487 | - | 418 | 134301169 | FTW_2078 | - | tmRNA |
1896326 | 1896402 | - | 77 | 134301169 | FTW_2048 | - | 06 Asp tRNA |
1896407 | 1896482 | - | 76 | 134301169 | FTW_2061 | - | 12 Thr tRNA |