Геном прокариот/Материалы:NC 009332
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Базовый уровень статей |
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LOCUS NC_009332 1841271 bp DNA circular BCT 14-AUG-2007
DEFINITION Streptococcus pyogenes str. Manfredo, complete genome.
ACCESSION NC_009332
VERSION NC_009332.1 GI:139472888
KEYWORDS complete genome.
SOURCE Streptococcus pyogenes str. Manfredo
ORGANISM Streptococcus pyogenes str. Manfredo
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae;
Streptococcus.
REFERENCE 1
AUTHORS Holden,M.T., Scott,A., Cherevach,I., Chillingworth,T., Churcher,C.,
Cronin,A., Dowd,L., Feltwell,T., Hamlin,N., Holroyd,S., Jagels,K.,
Moule,S., Mungall,K., Quail,M.A., Price,C., Rabbinowitsch,E.,
Sharp,S., Skelton,J., Whitehead,S., Barrell,B.G., Kehoe,M. and
Parkhill,J.
TITLE Complete genome of acute rheumatic fever-associated serotype M5
Streptococcus pyogenes strain manfredo
JOURNAL J. Bacteriol. 189 (4), 1473-1477 (2007)
PUBMED 17012393
REFERENCE 2 (bases 1 to 1841271)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (03-APR-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1841271)
AUTHORS Holden,M.T.G.
TITLE Direct Submission
JOURNAL Submitted (26-JUL-2006) Holden M.T.G., Pathogen Sequencing Unit,
Sanger Institute Wellcome Trust, Wellcome Trust Genome Campus,
Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM295007.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 17035 | 18586 | + | 1552 | 139472888 | SpyM5r01 | - | 16S ribosomal RNA |
| 18636 | 18708 | + | 73 | 139472888 | SpyM5t01 | - | Anticodon: TGC |
| 19007 | 21911 | + | 2905 | 139472888 | SpyM5r02 | - | 23S ribosomal RNA |
| 21995 | 22115 | + | 121 | 139472888 | SpyM5r03 | - | 5S ribosomal RNA |
| 22128 | 22200 | + | 73 | 139472888 | SpyM5t02 | - | Anticodon: TAC |
| 22218 | 22290 | + | 73 | 139472888 | SpyM5t03 | - | Anticodon: GTC |
| 22322 | 22394 | + | 73 | 139472888 | SpyM5t04 | - | Anticodon: TTT |
| 22400 | 22481 | + | 82 | 139472888 | SpyM5t05 | - | Anticodon: TAG |
| 22492 | 22564 | + | 73 | 139472888 | SpyM5t06 | - | Anticodon: TGT |
| 22577 | 22648 | + | 72 | 139472888 | SpyM5t07 | - | Anticodon: GCC |
| 22657 | 22741 | + | 85 | 139472888 | SpyM5t08 | - | Anticodon: TAA |
| 22758 | 22831 | + | 74 | 139472888 | SpyM5t09 | - | Anticodon: ACG |
| 22838 | 22911 | + | 74 | 139472888 | SpyM5t10 | - | Anticodon: TGG |
| 23036 | 24587 | + | 1552 | 139472888 | SpyM5r04 | - | 16S ribosomal RNA |
| 24637 | 24709 | + | 73 | 139472888 | SpyM5t11 | - | Anticodon: TGC |
| 25009 | 27913 | + | 2905 | 139472888 | SpyM5r05 | - | 23S ribosomal RNA |
| 27996 | 28116 | + | 121 | 139472888 | SpyM5r06 | - | 5S ribosomal RNA |
| 28129 | 28201 | + | 73 | 139472888 | SpyM5t12 | - | Anticodon: TAC |
| 28219 | 28291 | + | 73 | 139472888 | SpyM5t13 | - | Anticodon: GTC |
| 28323 | 28395 | + | 73 | 139472888 | SpyM5t14 | - | Anticodon: TTT |
| 28401 | 28482 | + | 82 | 139472888 | SpyM5t15 | - | Anticodon: TAG |
| 28493 | 28565 | + | 73 | 139472888 | SpyM5t16 | - | Anticodon: TGT |
| 28578 | 28649 | + | 72 | 139472888 | SpyM5t17 | - | Anticodon: GCC |
| 28658 | 28742 | + | 85 | 139472888 | SpyM5t18 | - | Anticodon: TAA |
| 28759 | 28832 | + | 74 | 139472888 | SpyM5t19 | - | Anticodon: ACG |
| 28839 | 28912 | + | 74 | 139472888 | SpyM5t20 | - | Anticodon: TGG |
| 28918 | 28991 | + | 74 | 139472888 | SpyM5t21 | - | Anticodon: CAT |
| 29012 | 29085 | + | 74 | 139472888 | SpyM5t22 | - | Anticodon: CAT |
| 29108 | 29197 | + | 90 | 139472888 | SpyM5t23 | - | Anticodon: TGA |
| 29220 | 29292 | + | 73 | 139472888 | SpyM5t24 | - | Anticodon: GAA |
| 29305 | 29375 | + | 71 | 139472888 | SpyM5t25 | - | Anticodon: TCC |
| 29410 | 29483 | + | 74 | 139472888 | SpyM5t26 | - | Anticodon: GAT |
| 29493 | 29580 | + | 88 | 139472888 | SpyM5t27 | - | Anticodon: GCT |
| 81660 | 83211 | + | 1552 | 139472888 | SpyM5r07 | - | 16S ribosomal RNA |
| 83261 | 83333 | + | 73 | 139472888 | SpyM5t28 | - | Anticodon: TGC |
| 83633 | 86537 | + | 2905 | 139472888 | SpyM5r08 | - | 23S ribosomal RNA |
| 86620 | 86740 | + | 121 | 139472888 | SpyM5r09 | - | 5S ribosomal RNA |
| 86753 | 86825 | + | 73 | 139472888 | SpyM5t29 | - | Anticodon: TAC |
| 86831 | 86901 | + | 71 | 139472888 | SpyM5t30 | - | Anticodon: TCC |
| 86936 | 87009 | + | 74 | 139472888 | SpyM5t31 | - | Anticodon: GAT |
| 87032 | 87103 | + | 72 | 139472888 | SpyM5t32 | - | Anticodon: TTC |
| 87114 | 87203 | + | 90 | 139472888 | SpyM5t33 | - | Anticodon: TGA |
| 87213 | 87286 | + | 74 | 139472888 | SpyM5t34 | - | Anticodon: CAT |
| 87307 | 87379 | + | 73 | 139472888 | SpyM5t35 | - | Anticodon: GAA |
| 87399 | 87479 | + | 81 | 139472888 | SpyM5t36 | - | Anticodon: GTA |
| 87486 | 87556 | + | 71 | 139472888 | SpyM5t37 | - | Anticodon: CCA |
| 87568 | 87640 | + | 73 | 139472888 | SpyM5t38 | - | Anticodon: GTG |
| 87649 | 87720 | + | 72 | 139472888 | SpyM5t39 | - | Anticodon: TTG |
| 87740 | 87823 | + | 84 | 139472888 | SpyM5t40 | - | Anticodon: CAA |
| 184026 | 184127 | + | 102 | 139472888 | SpyM5s01 | - | |
| 207230 | 207314 | + | 85 | 139472888 | SpyM5s02 | - | |
| 259006 | 260557 | + | 1552 | 139472888 | SpyM5r10 | - | 16S ribosomal RNA |
| 260607 | 260679 | + | 73 | 139472888 | SpyM5t41 | - | Anticodon: TGC |
| 260979 | 263883 | + | 2905 | 139472888 | SpyM5r11 | - | 23S ribosomal RNA |
| 263966 | 264086 | + | 121 | 139472888 | SpyM5r12 | - | 5S ribosomal RNA |
| 264087 | 264160 | + | 74 | 139472888 | SpyM5t42 | - | Anticodon: GTT |
| 264240 | 264313 | + | 74 | 139472888 | SpyM5t43 | - | Anticodon: ACG |
| 273929 | 274014 | + | 86 | 139472888 | SpyM5t44 | - | Anticodon: AAG |
| 410560 | 410646 | + | 87 | 139472888 | SpyM5t45 | - | Anticodon: GGA |
| 475406 | 475735 | + | 330 | 139472888 | SpyM5s03 | - | |
| 504760 | 506311 | + | 1552 | 139472888 | SpyM5r13 | - | 16S ribosomal RNA |
| 506361 | 506433 | + | 73 | 139472888 | SpyM5t46 | - | Anticodon: TGC |
| 506733 | 509637 | + | 2905 | 139472888 | SpyM5r14 | - | 23S ribosomal RNA |
| 509720 | 509840 | + | 121 | 139472888 | SpyM5r15 | - | 5S ribosomal RNA |
| 509853 | 509925 | + | 73 | 139472888 | SpyM5t47 | - | Anticodon: TAC |
| 509943 | 510015 | + | 73 | 139472888 | SpyM5t48 | - | Anticodon: GTC |
| 510047 | 510119 | + | 73 | 139472888 | SpyM5t49 | - | Anticodon: TTT |
| 510125 | 510206 | + | 82 | 139472888 | SpyM5t50 | - | Anticodon: TAG |
| 510217 | 510289 | + | 73 | 139472888 | SpyM5t51 | - | Anticodon: TGT |
| 510325 | 510398 | + | 74 | 139472888 | SpyM5t52 | - | Anticodon: GAT |
| 510421 | 510492 | + | 72 | 139472888 | SpyM5t53 | - | Anticodon: TTC |
| 584329 | 584399 | - | 71 | 139472888 | SpyM5t54 | - | Anticodon: GGT |
| 809662 | 810009 | - | 348 | 139472888 | SpyM5s04 | - | |
| 939668 | 939762 | - | 95 | 139472888 | SpyM5s05 | - | |
| 1088406 | 1088477 | - | 72 | 139472888 | SpyM5t55 | - | Anticodon: CCG |
| 1089922 | 1089993 | - | 72 | 139472888 | SpyM5t56 | - | Anticodon: TTG |
| 1090044 | 1090124 | - | 81 | 139472888 | SpyM5t57 | - | Anticodon: GTA |
| 1259382 | 1259453 | - | 72 | 139472888 | SpyM5t58 | - | Anticodon: CCT |
| 1356649 | 1356745 | + | 97 | 139472888 | SpyM5s06 | - | |
| 1426816 | 1427041 | - | 226 | 139472888 | SpyM5s07 | - | |
| 1522223 | 1522347 | - | 125 | 139472888 | SpyM5s08 | - | |
| 1569219 | 1569292 | - | 74 | 139472888 | SpyM5t59 | - | Anticodon: ACG |
| 1569372 | 1569445 | - | 74 | 139472888 | SpyM5t60 | - | Anticodon: GTT |
| 1569448 | 1569568 | - | 121 | 139472888 | SpyM5r16 | - | 5S ribosomal RNA |
| 1569651 | 1572555 | - | 2905 | 139472888 | SpyM5r17 | - | 23S ribosomal RNA |
| 1572853 | 1572925 | - | 73 | 139472888 | SpyM5t61 | - | Anticodon: TGC |
| 1572975 | 1574526 | - | 1552 | 139472888 | SpyM5r18 | - | 16S ribosomal RNA |
| 1657017 | 1657089 | + | 73 | 139472888 | SpyM5t62 | - | Anticodon: CTT |
| 1717729 | 1717799 | - | 71 | 139472888 | SpyM5t63 | - | Anticodon: GCA |
| 1830700 | 1830958 | - | 259 | 139472888 | SpyM5s09 | - | |
| 1836820 | 1836893 | - | 74 | 139472888 | SpyM5t64 | - | Anticodon: GTT |
| 1836927 | 1836998 | - | 72 | 139472888 | SpyM5t65 | - | Anticodon: TTC |
| 1838261 | 1838334 | + | 74 | 139472888 | SpyM5t66 | - | Anticodon: TCT |