Геном прокариот/Материалы:NC 009480
 |
Базовый уровень статей |
 |
LOCUS NC_009480 3297891 bp DNA circular BCT 14-AUG-2007
DEFINITION Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete
genome.
ACCESSION NC_009480
VERSION NC_009480.1 GI:148271178
KEYWORDS complete genome.
SOURCE Clavibacter michiganensis subsp. michiganensis NCPPB 382
ORGANISM Clavibacter michiganensis subsp. michiganensis NCPPB 382
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Micrococcineae; Microbacteriaceae; Clavibacter.
REFERENCE 1
AUTHORS Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J.,
Gaigalat,L., Goesmann,A., Graefen,I., Kalinowski,J., Kaup,O.,
Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S.,
Rueckert,C., Schneiker,S., Zellermann,E.M., Puehler,A.,
Eichenlaub,R., Kaiser,O. and Bartels,D.
TITLE Genome sequence of the Tomato-pathogenic Actinomycete Clavibacter
michiganensis subsp. michiganensis NCPPB382
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3297891)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (23-MAY-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3297891)
AUTHORS Linke,B.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2007) Linke B., Center For Biotechnology,
Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld,
GERMANY
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM711867.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 11222 | 11298 | + | 77 | 148271178 | CMM_tRNA_0001 | - | Anticodon: GAT |
| 11379 | 11451 | + | 73 | 148271178 | CMM_tRNA_0002 | - | Anticodon: TGC |
| 25622 | 25708 | + | 87 | 148271178 | CMM_tRNA_0003 | - | Anticodon: CAG |
| 602300 | 602387 | + | 88 | 148271178 | CMM_tRNA_0004 | - | Anticodon: TGA |
| 604058 | 604149 | + | 92 | 148271178 | CMM_tRNA_0005 | - | Anticodon: GCT |
| 609908 | 609980 | + | 73 | 148271178 | CMM_tRNA_0006 | - | Anticodon: ACG |
| 958577 | 958652 | - | 76 | 148271178 | CMM_tRNA_0007 | - | Anticodon: GAA |
| 958722 | 958798 | - | 77 | 148271178 | CMM_tRNA_0008 | - | Anticodon: GTC |
| 958820 | 958895 | - | 76 | 148271178 | CMM_tRNA_0009 | - | Anticodon: TTC |
| 1018250 | 1018337 | - | 88 | 148271178 | CMM_tRNA_0010 | - | Anticodon: GGA |
| 1022312 | 1022415 | + | 104 | 148271178 | SRP_bact | - | |
| 1055698 | 1055771 | - | 74 | 148271178 | CMM_tRNA_0011 | - | Anticodon: CGG |
| 1072979 | 1073054 | + | 76 | 148271178 | CMM_tRNA_0012 | - | Anticodon: CGT |
| 1107918 | 1108062 | - | 145 | 148271178 | RFN | - | |
| 1219040 | 1219115 | + | 76 | 148271178 | CMM_tRNA_0013 | - | Anticodon: CTT |
| 1270326 | 1270397 | + | 72 | 148271178 | CMM_tRNA_0014 | - | Anticodon: CTG |
| 1279736 | 1279859 | - | 124 | 148271178 | yybP-ykoY2 | - | |
| 1281203 | 1281278 | + | 76 | 148271178 | CMM_tRNA_0015 | - | Anticodon: CTC |
| 1304816 | 1304887 | + | 72 | 148271178 | CMM_tRNA_0016 | - | Anticodon: CCG |
| 1377056 | 1377132 | + | 77 | 148271178 | CMM_tRNA_0017 | - | Anticodon: CAT |
| 1472248 | 1472332 | - | 85 | 148271178 | CMM_tRNA_0018 | - | Anticodon: TAG |
| 1484336 | 1484711 | + | 376 | 148271178 | CMM_rRNA_0001 | - | |
| 1627675 | 1627786 | + | 112 | 148271178 | THI | - | |
| 1632234 | 1632309 | - | 76 | 148271178 | CMM_tRNA_0019 | - | Anticodon: GTG |
| 1633626 | 1633701 | + | 76 | 148271178 | CMM_tRNA_0020 | - | Anticodon: TCT |
| 1655431 | 1655504 | - | 74 | 148271178 | CMM_tRNA_0021 | - | Anticodon: TCC |
| 1655696 | 1655771 | + | 76 | 148271178 | CMM_tRNA_0022 | - | Anticodon: TGG |
| 1697559 | 1697634 | + | 76 | 148271178 | CMM_tRNA_0023 | - | Anticodon: GGC |
| 1805904 | 1805979 | - | 76 | 148271178 | CMM_tRNA_0024 | - | Anticodon: GTT |
| 1809026 | 1809099 | + | 74 | 148271178 | CMM_tRNA_0025 | - | Anticodon: CAT |
| 1838068 | 1838143 | + | 76 | 148271178 | CMM_tRNA_0026 | - | Anticodon: TAC |
| 1842865 | 1843196 | + | 332 | 148271178 | CMM_rRNA_0002 | - | |
| 1922019 | 1922104 | + | 86 | 148271178 | CMM_tRNA_0027 | - | Anticodon: GAG |
| 1990115 | 1990200 | + | 86 | 148271178 | CMM_tRNA_0028 | - | Anticodon: CAA |
| 2060091 | 2060165 | - | 75 | 148271178 | CMM_tRNA_0029 | - | Anticodon: GAC |
| 2060176 | 2060249 | - | 74 | 148271178 | CMM_tRNA_0030 | - | Anticodon: GCA |
| 2060311 | 2060385 | - | 75 | 148271178 | CMM_tRNA_0031 | - | Anticodon: GCC |
| 2060666 | 2060741 | + | 76 | 148271178 | CMM_tRNA_0032 | - | Anticodon: CAC |
| 2228446 | 2228519 | - | 74 | 148271178 | CMM_tRNA_0033 | - | Anticodon: GGG |
| 2247692 | 2247815 | - | 124 | 148271178 | CMM_RNA_0001 | - | 5S ribosomal RNA |
| 2251470 | 2252999 | - | 1530 | 148271178 | CMM_RNA_0001a | - | 16S ribosomal RNA |
| 2388450 | 2388532 | + | 83 | 148271178 | THI2 | - | |
| 2494562 | 2494643 | - | 82 | 148271178 | gcvT | - | |
| 2555753 | 2555830 | - | 78 | 148271178 | CMM_tRNA_0034 | - | Anticodon: TAA |
| 2577446 | 2577520 | - | 75 | 148271178 | CMM_tRNA_0035 | - | Anticodon: TTG |
| 2755189 | 2755264 | - | 76 | 148271178 | CMM_tRNA_0036 | - | Anticodon: CGC |
| 2763910 | 2763981 | + | 72 | 148271178 | CMM_tRNA_0037 | - | Anticodon: CCT |
| 2798325 | 2798397 | - | 73 | 148271178 | CMM_tRNA_0038 | - | Anticodon: TGT |
| 2827156 | 2827231 | + | 76 | 148271178 | CMM_tRNA_0039 | - | Anticodon: TTT |
| 2868024 | 2868147 | - | 124 | 148271178 | CMM_RNA_0002 | - | 5S ribosomal RNA |
| 2871802 | 2873331 | - | 1530 | 148271178 | CMM_RNA_0002a | - | 16S ribosomal RNA |
| 3072543 | 3072632 | - | 90 | 148271178 | CMM_tRNA_0040 | - | Anticodon: CGA |
| 3118409 | 3118484 | - | 76 | 148271178 | CMM_tRNA_0041 | - | Anticodon: CCA |
| 3122985 | 3123058 | - | 74 | 148271178 | CMM_tRNA_0042 | - | Anticodon: CAT |
| 3123098 | 3123172 | - | 75 | 148271178 | CMM_tRNA_0043 | - | Anticodon: GGT |
| 3130370 | 3130454 | - | 85 | 148271178 | CMM_tRNA_0044 | - | Anticodon: GTA |
| 3192906 | 3193037 | + | 132 | 148271178 | yybP-ykoY | - | |
| 3224558 | 3224631 | + | 74 | 148271178 | CMM_tRNA_0045 | - | Anticodon: CCC |