Геном прокариот/Материалы:NC 009567

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009567            1887192 bp    DNA     circular BCT 05-SEP-2007
   DEFINITION  Haemophilus influenzae PittGG, complete genome.
   ACCESSION   NC_009567
   VERSION     NC_009567.1  GI:148826757
   KEYWORDS    .
   SOURCE      Haemophilus influenzae PittGG
     ORGANISM  Haemophilus influenzae PittGG
               Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
               Pasteurellaceae; Haemophilus.
   REFERENCE   1  (bases 1 to 1887192)
     AUTHORS   Hogg,J.S., Hu,F.Z., Janto,B., Boissy,R., Hayes,J., Keefe,R.,
               Post,J.C. and Ehrlich,G.D.
     TITLE     Characterization and modeling of the Haemophilus influenzae core
               and supragenomes based on the complete genomic sequences of Rd and
               12 clinical nontypeable strains
     JOURNAL   (er) Genome Biol. 8 (6), R103 (2007) In press
      PUBMED   17550610
   REFERENCE   2  (bases 1 to 1887192)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (14-JUN-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1887192)
     AUTHORS   Ehrlich,G.D.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-APR-2007) Center for Genomic Sciences,
               Allegheny-Singer Research Institute, 320 E. North Ave. 11th Floor,
               Pittsburgh, PA 15212-4772, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000672.
               Annotation was added by the NCBI Prokaryotic Genomes Automatic
               Annotation Pipeline Group.  Information about the Pipeline can be
               found here:
               http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
               aware that the annotation is done automatically with little or no
               manual curation.
               Annotation updated by the NCBI Prokaryotic Genomes Automatic
               Annotation Pipeline Group on September 9, 2007.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
8968	9044	+	77	148826757	CGSHiGG_t10227	-	^{13 Val tRNA}
171204	171289	-	86	148826757	CGSHiGG_t10363	-	^{15 Leu tRNA}
269769	269845	-	77	148826757	CGSHiGG_t10365	-	^{16 Met tRNA}
303249	303324	-	76	148826757	CGSHiGG_t10367	-	^{07 Asn tRNA}
416927	417002	+	76	148826757	CGSHiGG_t10369	-	^{01 Gly tRNA}
439167	439286	-	120	148826757	CGSHiGG_r10325	-	5S ribosomal RNA
439478	441199	-	1722	148826757	CGSHiGG_r10351	-	23S ribosomal RNA
441200	441322	-	123	148826757	CGSHiGG_r10351	-	intervening sequence
441323	441939	-	617	148826757	CGSHiGG_r10351	-	23S ribosomal RNA
441940	442051	-	112	148826757	CGSHiGG_r10351	-	intervening sequence
442052	442593	-	542	148826757	CGSHiGG_r10351	-	23S ribosomal RNA
442865	442940	-	76	148826757	CGSHiGG_t10371	-	^{04 Glu tRNA}
443072	444611	-	1540	148826757	CGSHiGG_r10337	-	16S ribosomal RNA
499930	500019	+	90	148826757	CGSHiGG_t10373	-	^{08 Ser tRNA}
544393	544468	+	76	148826757	CGSHiGG_t10375	-	^{01 Gly tRNA}
544475	544548	+	74	148826757	CGSHiGG_t10377	-	^{19 Cys tRNA}
544576	544662	+	87	148826757	CGSHiGG_t10379	-	^{15 Leu tRNA}
544713	544788	+	76	148826757	CGSHiGG_t10381	-	^{10 Lys tRNA}
578998	579117	-	120	148826757	CGSHiGG_r10327	-	5S ribosomal RNA
579358	581079	-	1722	148826757	CGSHiGG_r10353	-	23S ribosomal RNA
581080	581202	-	123	148826757	CGSHiGG_r10353	-	intervening sequence
581203	581819	-	617	148826757	CGSHiGG_r10353	-	23S ribosomal RNA
581820	581931	-	112	148826757	CGSHiGG_r10353	-	intervening sequence
581932	582473	-	542	148826757	CGSHiGG_r10353	-	23S ribosomal RNA
582885	582960	-	76	148826757	CGSHiGG_t10383	-	^{02 Ala tRNA}
583046	583122	-	77	148826757	CGSHiGG_t10385	-	^{14 Ile tRNA}
583202	584741	-	1540	148826757	CGSHiGG_r10339	-	16S ribosomal RNA
584917	584993	-	77	148826757	CGSHiGG_t10387	-	^{03 Pro tRNA}
585015	585090	-	76	148826757	CGSHiGG_t10389	-	^{09 His tRNA}
585117	585193	-	77	148826757	CGSHiGG_t10391	-	^{11 Arg tRNA}
587607	587683	-	77	148826757	CGSHiGG_t10393	-	^{16 Met tRNA}
596281	596356	+	76	148826757	CGSHiGG_t10395	-	^{01 Gly tRNA}
596361	596447	+	87	148826757	CGSHiGG_t10397	-	^{15 Leu tRNA}
596499	596574	+	76	148826757	CGSHiGG_t10399	-	^{10 Lys tRNA}
608977	609053	-	77	148826757	CGSHiGG_t10401	-	^{06 Asp tRNA}
609077	609153	-	77	148826757	CGSHiGG_t10403	-	^{06 Asp tRNA}
699187	699306	-	120	148826757	CGSHiGG_r10329	-	5S ribosomal RNA
699547	701268	-	1722	148826757	CGSHiGG_r10355	-	23S ribosomal RNA
701269	701391	-	123	148826757	CGSHiGG_r10355	-	intervening sequence
701392	702008	-	617	148826757	CGSHiGG_r10355	-	23S ribosomal RNA
702009	702120	-	112	148826757	CGSHiGG_r10355	-	intervening sequence
702121	702662	-	542	148826757	CGSHiGG_r10355	-	product
702934	703009	-	76	148826757	CGSHiGG_t10405	-	^{04 Glu tRNA}
703141	704680	-	1540	148826757	CGSHiGG_r10341	-	16S ribosomal RNA
766832	766921	-	90	148826757	CGSHiGG_t10407	-	^{08 Ser tRNA}
785483	785558	-	76	148826757	CGSHiGG_t10409	-	^{02 Ala tRNA}
787371	787446	+	76	148826757	CGSHiGG_t10411	-	^{13 Val tRNA}
787505	787580	+	76	148826757	CGSHiGG_t10413	-	^{13 Val tRNA}
787633	787708	+	76	148826757	CGSHiGG_t10415	-	^{13 Val tRNA}
833409	833498	-	90	148826757	CGSHiGG_t10417	-	^{08 Ser tRNA}
925415	925490	-	76	148826757	CGSHiGG_t10419	-	^{10 Lys tRNA}
925514	925589	-	76	148826757	CGSHiGG_t10421	-	^{10 Lys tRNA}
991432	991517	+	86	148826757	CGSHiGG_t10423	-	^{15 Leu tRNA}
1123258	1123333	-	76	148826757	CGSHiGG_t10425	-	^{12 Thr tRNA}
1123337	1123411	-	75	148826757	CGSHiGG_t10427	-	^{01 Gly tRNA}
1123454	1123538	-	85	148826757	CGSHiGG_t10429	-	^{18 Tyr tRNA}
1123568	1123644	-	77	148826757	CGSHiGG_t10431	-	Xaa tRNA
1134264	1134383	-	120	148826757	CGSHiGG_r10331	-	5S ribosomal RNA
1134608	1136327	-	1720	148826757	CGSHiGG_r10357	-	23S ribosomal RNA
1136328	1136450	-	123	148826757	CGSHiGG_r10357	-	intervening sequence
1136451	1137067	-	617	148826757	CGSHiGG_r10357	-	23S ribosomal RNA
1137068	1137179	-	112	148826757	CGSHiGG_r10357	-	intervening sequence
1137180	1137721	-	542	148826757	CGSHiGG_r10357	-	23S ribosomal RNA
1137993	1138068	-	76	148826757	CGSHiGG_t10433	-	^{04 Glu tRNA}
1138200	1139736	-	1537	148826757	CGSHiGG_r10343	-	16S ribosomal RNA
1181244	1181320	-	77	148826757	CGSHiGG_t10435	-	^{11 Arg tRNA}
1181378	1181454	-	77	148826757	CGSHiGG_t10437	-	^{11 Arg tRNA}
1181475	1181568	-	94	148826757	CGSHiGG_t10439	-	^{08 Ser tRNA}
1251738	1251832	-	95	148826757	CGSHiGG_t10441	-	Sec tRNA
1269085	1270624	+	1540	148826757	CGSHiGG_r10345	-	16S ribosomal RNA
1270704	1270780	+	77	148826757	CGSHiGG_r10469	-	^{14 Ile tRNA}
1270866	1270941	+	76	148826757	CGSHiGG_t10443	-	^{02 Ala tRNA}
1271353	1271894	+	542	148826757	CGSHiGG_r10359	-	23S ribosomal RNA
1271895	1272006	+	112	148826757	CGSHiGG_r10359	-	intervening sequence
1272007	1272623	+	617	148826757	CGSHiGG_r10359	-	23S ribosomal RNA
1272624	1272746	+	123	148826757	CGSHiGG_r10359	-	intervening sequence
1272747	1274468	+	1722	148826757	CGSHiGG_r10359	-	23S ribosomal RNA
1274709	1274828	+	120	148826757	CGSHiGG_r10333	-	5S ribosomal RNA
1274873	1274992	+	120	148826757	CGSHiGG_r10349	-	5S ribosomal RNA
1275003	1275079	+	77	148826757	CGSHiGG_t10445	-	^{06 Asp tRNA}
1275108	1275183	+	76	148826757	CGSHiGG_t10447	-	^{20 Trp tRNA}
1286680	1286756	+	77	148826757	CGSHiGG_t10449	-	^{03 Pro tRNA}
1286804	1286880	+	77	148826757	CGSHiGG_t10451	-	^{11 Arg tRNA}
1302695	1304234	+	1540	148826757	CGSHiGG_r10347	-	16S ribosomal RNA
1304366	1304441	+	76	148826757	CGSHiGG_t10453	-	^{04 Glu tRNA}
1304713	1305254	+	542	148826757	CGSHiGG_r10361	-	23S ribosomal RNA
1305255	1305366	+	112	148826757	CGSHiGG_r10361	-	intervening sequence
1305367	1305983	+	617	148826757	CGSHiGG_r10361	-	23S ribosomal RNA
1305984	1306106	+	123	148826757	CGSHiGG_r10361	-	intervening sequence
1306107	1307828	+	1722	148826757	CGSHiGG_r10361	-	23S ribosomal RNA
1308068	1308187	+	120	148826757	CGSHiGG_r10335	-	5S ribosomal RNA
1356425	1356500	+	76	148826757	CGSHiGG_t10455	-	^{17 Phe tRNA}
1356503	1356578	+	76	148826757	CGSHiGG_t10457	-	^{07 Asn tRNA}
1512626	1512702	-	77	148826757	CGSHiGG_t10459	-	^{16 Met tRNA}
1835264	1835340	+	77	148826757	CGSHiGG_t10461	-	^{16 Met tRNA}
1835346	1835430	+	85	148826757	CGSHiGG_t10463	-	^{15 Leu tRNA}
1835459	1835533	+	75	148826757	CGSHiGG_t10465	-	^{05 Gln tRNA}
1835581	1835655	+	75	148826757	CGSHiGG_t10467	-	^{05 Gln tRNA}