Геном прокариот/Материалы:NC 009613
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Базовый уровень статей |
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LOCUS NC_009613 2861988 bp DNA circular BCT 29-JUN-2007
DEFINITION Flavobacterium psychrophilum JIP02/86, complete genome.
ACCESSION NC_009613
VERSION NC_009613.1 GI:150024114
KEYWORDS complete genome.
SOURCE Flavobacterium psychrophilum JIP02/86
ORGANISM Flavobacterium psychrophilum JIP02/86
Bacteria; Bacteroidetes; Flavobacteria; Flavobacteriales;
Flavobacteriaceae; Flavobacterium.
REFERENCE 1
AUTHORS Duchaud,E., Boussaha,M., Loux,V., Bernardet,J.F., Michel,C.,
Kerouault,B., Mondot,S., Nicolas,P., Bossy,R., Caron,C.,
Bessieres,P., Gibrat,J.F., Dumetz,F., Le Henaff,M. and
Benmansour,A.
TITLE Complete genome sequence of the fish pathogen Flavobacterium
psychrophilum
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2861988)
AUTHORS Duchaud,E. and Loux,V.
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2006) Loux V., Unite MIG, Duchaud E., Unite VIM,
I.N.R.A, Domaine de Vilvert, 78352 Jouy en Josas Cedex, FRANCE
REFERENCE 3 (bases 1 to 2861988)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (14-SEP-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM398681.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 103296 | 103369 | - | 74 | 150024114 | FP0080 | - | Anticodon: GTT |
| 180497 | 180579 | + | 83 | 150024114 | FP0148 | - | Anticodon: CAA |
| 180870 | 180954 | - | 85 | 150024114 | FP0149 | - | Anticodon: TAG |
| 285164 | 285237 | - | 74 | 150024114 | FP0236 | - | Anticodon: CAT |
| 309345 | 309421 | - | 77 | 150024114 | FP0258 | - | Anticodon: GTC |
| 363538 | 363611 | + | 74 | 150024114 | FP0298 | - | Anticodon: TTG |
| 480665 | 480752 | - | 88 | 150024114 | FP0393 | - | Anticodon: TAA |
| 480793 | 480868 | - | 76 | 150024114 | FP0394 | - | Anticodon: GCC |
| 571666 | 573186 | + | 1521 | 150024114 | FP0471 | - | 16S ribosomal RNA |
| 573290 | 573366 | + | 77 | 150024114 | FP0472 | - | Anticodon: GAT |
| 573525 | 573601 | + | 77 | 150024114 | FP0473 | - | Anticodon: TGC |
| 573810 | 576609 | + | 2800 | 150024114 | FP0474 | - | 23S ribosomal RNA |
| 576861 | 576972 | + | 112 | 150024114 | FP0475 | - | 5S ribosomal RNA |
| 653859 | 653936 | - | 78 | 150024114 | FP0540 | - | Anticodon: TAC |
| 779551 | 779627 | - | 77 | 150024114 | FP0655 | - | Anticodon: GTG |
| 823512 | 823588 | + | 77 | 150024114 | FP0693 | - | Anticodon: ACG |
| 910550 | 910636 | + | 87 | 150024114 | FP0771 | - | Anticodon: GCT |
| 910652 | 910729 | + | 78 | 150024114 | FP0772 | - | Anticodon: TGG |
| 910760 | 910836 | + | 77 | 150024114 | FP0773 | - | Anticodon: TCT |
| 1039927 | 1041447 | + | 1521 | 150024114 | FP0896 | - | 16S ribosomal RNA |
| 1041551 | 1041627 | + | 77 | 150024114 | FP0897 | - | Anticodon: GAT |
| 1041786 | 1041862 | + | 77 | 150024114 | FP0898 | - | Anticodon: TGC |
| 1042071 | 1044870 | + | 2800 | 150024114 | FP0899 | - | 23S ribosomal RNA |
| 1045122 | 1045233 | + | 112 | 150024114 | FP0900 | - | 5S ribosomal RNA |
| 1071425 | 1071509 | - | 85 | 150024114 | FP0926 | - | Anticodon: GTA |
| 1231906 | 1231983 | + | 78 | 150024114 | FP1070 | - | Anticodon: TAC |
| 1238154 | 1238265 | - | 112 | 150024114 | FP1072 | - | 5S ribosomal RNA |
| 1238517 | 1241316 | - | 2800 | 150024114 | FP1073 | - | 23S ribosomal RNA |
| 1241525 | 1241601 | - | 77 | 150024114 | FP1074 | - | Anticodon: TGC |
| 1241760 | 1241836 | - | 77 | 150024114 | FP1075 | - | Anticodon: GAT |
| 1241940 | 1243460 | - | 1521 | 150024114 | FP1076 | - | 16S ribosomal RNA |
| 1286190 | 1286267 | + | 78 | 150024114 | FP1114 | - | Anticodon: TGG |
| 1373502 | 1373575 | - | 74 | 150024114 | FP1183 | - | Anticodon: CCA |
| 1374880 | 1374954 | - | 75 | 150024114 | FP1185 | - | Anticodon: GGT |
| 1375038 | 1375121 | - | 84 | 150024114 | FP1186 | - | Anticodon: GTA |
| 1375260 | 1375336 | - | 77 | 150024114 | FP1187 | - | Anticodon: TGT |
| 1584636 | 1584747 | - | 112 | 150024114 | FP1392 | - | 5S ribosomal RNA |
| 1584999 | 1587798 | - | 2800 | 150024114 | FP1393 | - | 23S ribosomal RNA |
| 1588007 | 1588083 | - | 77 | 150024114 | FP1394 | - | Anticodon: TGC |
| 1588242 | 1588318 | - | 77 | 150024114 | FP1395 | - | Anticodon: GAT |
| 1588422 | 1589942 | - | 1521 | 150024114 | FP1396 | - | 16S ribosomal RNA |
| 1591492 | 1591566 | - | 75 | 150024114 | FP1398 | - | Anticodon: TTC |
| 1591598 | 1591669 | - | 72 | 150024114 | FP1399 | - | Anticodon: TTC |
| 1637067 | 1637142 | + | 76 | 150024114 | FP1444 | - | Anticodon: TTT |
| 1637166 | 1637241 | + | 76 | 150024114 | FP1445 | - | Anticodon: TTT |
| 1637282 | 1637364 | + | 83 | 150024114 | FP1446 | - | Anticodon: GAG |
| 1720400 | 1720511 | - | 112 | 150024114 | FP1518 | - | 5S ribosomal RNA |
| 1720763 | 1723562 | - | 2800 | 150024114 | FP1519 | - | 23S ribosomal RNA |
| 1723771 | 1723847 | - | 77 | 150024114 | FP1520 | - | Anticodon: TGC |
| 1724006 | 1724082 | - | 77 | 150024114 | FP1521 | - | Anticodon: GAT |
| 1724186 | 1725706 | - | 1521 | 150024114 | FP1522 | - | 16S ribosomal RNA |
| 1805798 | 1805885 | - | 88 | 150024114 | FP1588 | - | Anticodon: TGA |
| 2031353 | 2031426 | - | 74 | 150024114 | FP1787 | - | Anticodon: TGT |
| 2225071 | 2225146 | + | 76 | 150024114 | FP1963 | - | Anticodon: CAT |
| 2225178 | 2225253 | + | 76 | 150024114 | FP1964 | - | Anticodon: CAT |
| 2268952 | 2269028 | - | 77 | 150024114 | FP2004 | - | Anticodon: CAT |
| 2314062 | 2314135 | - | 74 | 150024114 | FP2051 | - | Anticodon: TCG |
| 2404787 | 2404859 | - | 73 | 150024114 | FP2131 | - | Anticodon: TCC |
| 2497973 | 2498084 | - | 112 | 150024114 | FP2190 | - | 5S ribosomal RNA |
| 2498336 | 2501135 | - | 2800 | 150024114 | FP2191 | - | 23S ribosomal RNA |
| 2501344 | 2501420 | - | 77 | 150024114 | FP2192 | - | Anticodon: TGC |
| 2501579 | 2501655 | - | 77 | 150024114 | FP2193 | - | Anticodon: GAT |
| 2501759 | 2503279 | - | 1521 | 150024114 | FP2194 | - | 16S ribosomal RNA |
| 2624029 | 2624116 | + | 88 | 150024114 | FP2292 | - | Anticodon: GGA |
| 2744027 | 2744103 | + | 77 | 150024114 | FP2400 | - | Anticodon: GGC |
| 2792260 | 2792335 | + | 76 | 150024114 | FP2435 | - | Anticodon: GAA |
| 2855266 | 2855339 | - | 74 | 150024114 | FP2492 | - | Anticodon: GCA |