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Геном прокариот/Материалы:NC 009668

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   LOCUS       NC_009668            1895911 bp    DNA     circular BCT 25-JUL-2007
   DEFINITION  Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence.
   ACCESSION   NC_009668
   VERSION     NC_009668.1  GI:153010078
   KEYWORDS    .
   SOURCE      Ochrobactrum anthropi ATCC 49188
     ORGANISM  Ochrobactrum anthropi ATCC 49188
               Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
               Brucellaceae; Ochrobactrum.
   REFERENCE   1  (bases 1 to 1895911)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
               Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M.,
               Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
               Mikhailova,N., Garcia,E. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of chromosome 2 of Ochrobactrum anthropi ATCC
               49188
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 1895911)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (24-JUL-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 1895911)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
               Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M.,
               Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
               Mikhailova,N., Garcia,E. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (10-JUL-2007) US DOE Joint Genome Institute, 2800
               Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000759.
               URL -- http://www.jgi.doe.gov
               JGI Project ID: 2773013
               Source DNA available from Emilio Garcia (garcia12@llnl.gov)
               Bacteria available from ATCC: ATCC 49188
               Contacts: Emilio Garcia (garcia12@llnl.gov)
                         Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-LLNL
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               The JGI and collaborators endorse the principles for the
               distribution and use of large scale sequencing data adopted by the
               larger genome sequencing community and urge users of this data to
               follow them. It is our intention to publish the work of this
               project in a timely fashion and we welcome collaborative
               interaction on the project and analysis.
               (http://www.genome.gov/page.cfm?pageID=10506376)
               Additional Note: This projects consists of 2 chromosomes and 4
               plasmids.
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
151860 151951 + 92 153010078 Oant_R0052 - Sec tRNA
299723 299796 - 74 153010078 Oant_R0053 - 05 Gln tRNA
456833 458308 + 1476 153010078 Oant_R0054 - 16S ribosomal RNA
458582 458658 + 77 153010078 Oant_R0055 - 14 Ile tRNA
458670 458745 + 76 153010078 Oant_R0056 - 02 Ala tRNA
459318 461922 + 2605 153010078 Oant_R0057 - 23S ribosomal RNA
462119 462232 + 114 153010078 Oant_R0058 - 5S ribosomal RNA
462286 462362 + 77 153010078 Oant_R0059 - 16 Met tRNA
611831 611905 - 75 153010078 Oant_R0060 - 01 Gly tRNA
992217 992306 - 90 153010078 Oant_R0061 - 08 Ser tRNA
1033554 1033629 - 76 153010078 Oant_R0062 - 10 Lys tRNA
1068874 1068947 + 74 153010078 Oant_R0063 - 19 Cys tRNA
1082135 1082209 - 75 153010078 Oant_R0064 - 07 Asn tRNA
1333797 1333873 - 77 153010078 Oant_R0065 - 09 His tRNA
1474675 1474750 + 76 153010078 Oant_R0066 - 12 Thr tRNA
1598030 1598106 - 77 153010078 Oant_R0067 - 16 Met tRNA
1598160 1598273 - 114 153010078 Oant_R0068 - 5S ribosomal RNA
1598470 1601074 - 2605 153010078 Oant_R0069 - 23S ribosomal RNA
1601647 1601722 - 76 153010078 Oant_R0070 - 02 Ala tRNA
1601734 1601810 - 77 153010078 Oant_R0071 - 14 Ile tRNA
1602084 1603559 - 1476 153010078 Oant_R0072 - 16S ribosomal RNA
1720645 1720719 + 75 153010078 Oant_R0073 - 13 Val tRNA