Геном прокариот/Материалы:NC 009782
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Базовый уровень статей |
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LOCUS NC_009782 2880168 bp DNA circular BCT 07-SEP-2007
DEFINITION Staphylococcus aureus subsp. aureus Mu3, complete genome.
ACCESSION NC_009782
VERSION NC_009782.1 GI:156978331
KEYWORDS .
SOURCE Staphylococcus aureus subsp. aureus Mu3
ORGANISM Staphylococcus aureus subsp. aureus Mu3
Bacteria; Firmicutes; Bacillales; Staphylococcus.
REFERENCE 1
AUTHORS Hiramatsu,K., Aritaka,N., Hanaki,H., Kawasaki,S., Hosoda,Y.,
Hori,S., Fukuchi,Y. and Kobayashi,I.
TITLE Dissemination in Japanese hospitals of strains of Staphylococcus
aureus heterogeneously resistant to vancomycin
JOURNAL Lancet 350 (9092), 1670-1673 (1997)
PUBMED 9400512
REFERENCE 2
AUTHORS Neoh,H., Cui,L. and Hiramatsu,K.
TITLE GraSR Two-component Regulatory System Is Associated with Converting
Mu3 from Hetero-VISA to VISA Phenotype
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2880168)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-SEP-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 2880168)
AUTHORS Hiramatsu,K. and Cui,L.
TITLE Direct Submission
JOURNAL Submitted (05-JAN-2007) Keiichi Hiramatsu, Juntendo University,
Department of Bacteriology, Faculty of Medicine; 1-1, Hongo
2-chome, Bunkyou-ku, Tokyo 113-8421, Japan
(E-mail:khiram06@med.juntendo.ac.jp, Tel:81-3-5802-1041,
Fax:81-3-5684-7830)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AP009324.
Please visit our web site
http://www.staphylococcus.org.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 24161 | 24235 | + | 75 | 156978331 | SAHV_t0001 | - | Anticodon: TTC |
| 24243 | 24318 | + | 76 | 156978331 | SAHV_t0002 | - | Anticodon: GTC |
| 522674 | 522766 | + | 93 | 156978331 | SAHV_t0003 | - | Anticodon: TGA |
| 531922 | 533476 | + | 1555 | 156978331 | SAHV_r0001 | - | 16S ribosomal RNA |
| 533841 | 536763 | + | 2923 | 156978331 | SAHV_r0002 | - | 23S ribosomal RNA |
| 536836 | 536950 | + | 115 | 156978331 | SAHV_r0003 | - | 5S ribosomal RNA |
| 575310 | 575424 | + | 115 | 156978331 | SAHV_r0004 | - | 5S ribosomal RNA |
| 575437 | 575512 | + | 76 | 156978331 | SAHV_t0004 | - | Anticodon: TAC |
| 575529 | 575604 | + | 76 | 156978331 | SAHV_t0005 | - | Anticodon: TGT |
| 575610 | 575687 | + | 78 | 156978331 | SAHV_t0006 | - | Anticodon: TTT |
| 575717 | 575791 | + | 75 | 156978331 | SAHV_t0007 | - | Anticodon: GCC |
| 575798 | 575888 | + | 91 | 156978331 | SAHV_t0008 | - | Anticodon: TAA |
| 575893 | 575969 | + | 77 | 156978331 | SAHV_t0009 | - | Anticodon: ACG |
| 575990 | 576066 | + | 77 | 156978331 | SAHV_t0010 | - | Anticodon: TGG |
| 576086 | 576163 | + | 78 | 156978331 | SAHV_t0011 | - | Anticodon: TGC |
| 576283 | 577837 | + | 1555 | 156978331 | SAHV_r0005 | - | 16S ribosomal RNA |
| 577929 | 578007 | + | 79 | 156978331 | SAHV_t0012 | - | Anticodon: GAT |
| 578173 | 581095 | + | 2923 | 156978331 | SAHV_r0006 | - | 23S ribosomal RNA |
| 581168 | 581282 | + | 115 | 156978331 | SAHV_r0007 | - | 5S ribosomal RNA |
| 853007 | 853081 | - | 75 | 156978331 | SAHV_t0013 | - | Anticodon: CGG |
| 869435 | 869793 | + | 359 | 156978331 | SAHV_tm0001 | - | tmRNA |
| 1080356 | 1080449 | - | 94 | 156978331 | SAHV_t0014 | - | Anticodon: GCT |
| 1080451 | 1080525 | - | 75 | 156978331 | SAHV_t0015 | - | Anticodon: GCT |
| 1229919 | 1229997 | - | 79 | 156978331 | SAHV_t0016 | - | Anticodon: TCT |
| 1961036 | 1961127 | - | 92 | 156978331 | SAHV_t0017 | - | Anticodon: GAA |
| 1961178 | 1961254 | - | 77 | 156978331 | SAHV_t0018 | - | Anticodon: CTT |
| 1961254 | 1961330 | - | 77 | 156978331 | SAHV_t0019 | - | Anticodon: GTT |
| 1961346 | 1961421 | - | 76 | 156978331 | SAHV_t0020 | - | Anticodon: TCC |
| 1961435 | 1961512 | - | 78 | 156978331 | SAHV_t0021 | - | Anticodon: GTG |
| 1961522 | 1961597 | - | 76 | 156978331 | SAHV_t0022 | - | Anticodon: GAA |
| 1961614 | 1961689 | - | 76 | 156978331 | SAHV_t0023 | - | Anticodon: GTC |
| 1961708 | 1961784 | - | 77 | 156978331 | SAHV_t0024 | - | Anticodon: CAT |
| 1995479 | 1995565 | - | 87 | 156978331 | SAHV_t0025 | - | Anticodon: CAA |
| 1995604 | 1995678 | - | 75 | 156978331 | SAHV_t0026 | - | Anticodon: TCC |
| 1995692 | 1995766 | - | 75 | 156978331 | SAHV_t0027 | - | Anticodon: TCC |
| 1995782 | 1995856 | - | 75 | 156978331 | SAHV_t0028 | - | Anticodon: TCC |
| 1995864 | 1995937 | - | 74 | 156978331 | SAHV_t0029 | - | Anticodon: GCA |
| 1995940 | 1996014 | - | 75 | 156978331 | SAHV_t0030 | - | Anticodon: TTG |
| 1996022 | 1996099 | - | 78 | 156978331 | SAHV_t0031 | - | Anticodon: GTG |
| 1996100 | 1996175 | - | 76 | 156978331 | SAHV_t0032 | - | Anticodon: CCA |
| 1996186 | 1996271 | - | 86 | 156978331 | SAHV_t0033 | - | Anticodon: GTA |
| 1996276 | 1996351 | - | 76 | 156978331 | SAHV_t0034 | - | Anticodon: TGT |
| 1996355 | 1996432 | - | 78 | 156978331 | SAHV_t0035 | - | Anticodon: GAA |
| 1996450 | 1996525 | - | 76 | 156978331 | SAHV_t0036 | - | Anticodon: GTC |
| 1996543 | 1996621 | - | 79 | 156978331 | SAHV_t0037 | - | Anticodon: CAT |
| 1996634 | 1996728 | - | 95 | 156978331 | SAHV_t0038 | - | Anticodon: TGA |
| 1996765 | 1996842 | - | 78 | 156978331 | SAHV_t0039 | - | Anticodon: GTC |
| 1996848 | 1996942 | - | 95 | 156978331 | SAHV_t0040 | - | Anticodon: TGA |
| 1996948 | 1997024 | - | 77 | 156978331 | SAHV_t0041 | - | Anticodon: CAT |
| 1997050 | 1997126 | - | 77 | 156978331 | SAHV_t0042 | - | Anticodon: CAT |
| 1997147 | 1997224 | - | 78 | 156978331 | SAHV_t0043 | - | Anticodon: TTG |
| 1997238 | 1997314 | - | 77 | 156978331 | SAHV_t0044 | - | Anticodon: TGG |
| 1997320 | 1997398 | - | 79 | 156978331 | SAHV_t0045 | - | Anticodon: ACG |
| 1997415 | 1997505 | - | 91 | 156978331 | SAHV_t0046 | - | Anticodon: TAA |
| 1997515 | 1997589 | - | 75 | 156978331 | SAHV_t0047 | - | Anticodon: GCC |
| 1997589 | 1997675 | - | 87 | 156978331 | SAHV_t0048 | - | Anticodon: TAG |
| 1997678 | 1997753 | - | 76 | 156978331 | SAHV_t0049 | - | Anticodon: TTT |
| 1997758 | 1997835 | - | 78 | 156978331 | SAHV_t0050 | - | Anticodon: TGT |
| 1997851 | 1997926 | - | 76 | 156978331 | SAHV_t0051 | - | Anticodon: TAC |
| 1997938 | 1998052 | - | 115 | 156978331 | SAHV_r0008 | - | 5S ribosomal RNA |
| 1998125 | 2001047 | - | 2923 | 156978331 | SAHV_r0009 | - | 23S ribosomal RNA |
| 2001260 | 2001337 | - | 78 | 156978331 | SAHV_t0052 | - | Anticodon: TGC |
| 2001354 | 2001432 | - | 79 | 156978331 | SAHV_t0053 | - | Anticodon: GAT |
| 2001521 | 2003075 | - | 1555 | 156978331 | SAHV_r0010 | - | 16S ribosomal RNA |
| 2187114 | 2187228 | - | 115 | 156978331 | SAHV_r0011 | - | 5S ribosomal RNA |
| 2187301 | 2190223 | - | 2923 | 156978331 | SAHV_r0012 | - | 23S ribosomal RNA |
| 2190693 | 2192247 | - | 1555 | 156978331 | SAHV_r0013 | - | 16S ribosomal RNA |
| 2192364 | 2192439 | - | 76 | 156978331 | SAHV_t0054 | - | Anticodon: TCC |
| 2192457 | 2192542 | - | 86 | 156978331 | SAHV_t0055 | - | Anticodon: GAG |
| 2301583 | 2301658 | - | 76 | 156978331 | SAHV_t0056 | - | Anticodon: TTT |
| 2301661 | 2301737 | - | 77 | 156978331 | SAHV_t0057 | - | Anticodon: TTG |
| 2301745 | 2301830 | - | 86 | 156978331 | SAHV_t0058 | - | Anticodon: TGT |
| 2301858 | 2301935 | - | 78 | 156978331 | SAHV_t0059 | - | Anticodon: TAC |
| 2301938 | 2302014 | - | 77 | 156978331 | SAHV_t0060 | - | Anticodon: TTC |
| 2302015 | 2302089 | - | 75 | 156978331 | SAHV_t0061 | - | Anticodon: GTT |
| 2302100 | 2302214 | - | 115 | 156978331 | SAHV_r0014 | - | 5S ribosomal RNA |
| 2302287 | 2305209 | - | 2923 | 156978331 | SAHV_r0015 | - | 23S ribosomal RNA |
| 2305679 | 2307233 | - | 1555 | 156978331 | SAHV_r0016 | - | 16S ribosomal RNA |