Материалы:NC 003295
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LOCUS NC_003295 3716413 bp DNA circular BCT 14-SEP-2007 DEFINITION Ralstonia solanacearum GMI1000, complete genome. ACCESSION NC_003295 VERSION NC_003295.1 GI:17544719 KEYWORDS . SOURCE Ralstonia solanacearum GMI1000 ORGANISM Ralstonia solanacearum GMI1000 Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia. REFERENCE 1 (bases 1 to 3716413) AUTHORS Salanoubat,M., Genin,S., Artiguenave,F., Gouzy,J., Mangenot,S., Arlat,M., Billault,A., Brottier,P., Camus,J.C., Cattolico,L., Chandler,M., Choisne,N., Claudel-Renard,C., Cunnac,S., Demange,N., Gaspin,C., Lavie,M., Moisan,A., Robert,C., Saurin,W., Schiex,T., Siguier,P., Thebault,P., Whalen,M., Wincker,P., Levy,M., Weissenbach,J. and Boucher,C.A. TITLE Genome sequence of the plant pathogen Ralstonia solanacearum JOURNAL Nature 415 (6871), 497-502 (2002) PUBMED 11823852 REFERENCE 2 (bases 1 to 3716413) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3716413) CONSRTM NCBI Microbial Genomes Annotation Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL646052. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
90731 | 90806 | + | 76 | 17544719 | RS02241 | - | 17 Phe tRNA |
423052 | 423128 | - | 77 | 17544719 | RS03325 | - | 05 Gln tRNA |
591327 | 591403 | - | 77 | 17544719 | RS04914 | - | 16 Met tRNA |
751241 | 751314 | - | 74 | 17544719 | RS01509 | - | 01 Gly tRNA |
786391 | 786466 | + | 76 | 17544719 | RS04831 | - | 10 Lys tRNA |
828199 | 828274 | - | 76 | 17544719 | RS04829 | - | 19 Cys tRNA |
942869 | 943228 | - | 360 | 17544719 | RSc0895.1 | - | |
1018649 | 1018723 | - | 75 | 17544719 | RS04383 | - | 11 Arg tRNA |
1126237 | 1126312 | + | 76 | 17544719 | RS04004 | - | 01 Gly tRNA |
1126367 | 1126442 | + | 76 | 17544719 | RS04003 | - | 01 Gly tRNA |
1126534 | 1126607 | + | 74 | 17544719 | RS04005 | - | 19 Cys tRNA |
1166558 | 1166633 | - | 76 | 17544719 | RS04002 | - | 10 Lys tRNA |
1170090 | 1170180 | - | 91 | 17544719 | RS04001 | - | 15 Leu tRNA |
1170259 | 1170334 | - | 76 | 17544719 | RS04000 | - | 07 Asn tRNA |
1230833 | 1230926 | + | 94 | 17544719 | RS04528 | - | 08 Ser tRNA |
1241575 | 1241650 | + | 76 | 17544719 | RS04529 | - | 02 Ala tRNA |
1241767 | 1241842 | + | 76 | 17544719 | RS04526 | - | 04 Glu tRNA |
1241907 | 1241983 | + | 77 | 17544719 | RS04530 | - | 06 Asp tRNA |
1242044 | 1242119 | + | 76 | 17544719 | RS04531 | - | 02 Ala tRNA |
1242236 | 1242311 | + | 76 | 17544719 | RS04527 | - | 04 Glu tRNA |
1242376 | 1242452 | + | 77 | 17544719 | RS04532 | - | 06 Asp tRNA |
1298061 | 1298145 | - | 85 | 17544719 | RS02877 | - | 15 Leu tRNA |
1386404 | 1386479 | + | 76 | 17544719 | RS02876 | - | 09 His tRNA |
1532266 | 1537938 | + | 5673 | 17544719 | RSc1431.1 | - | |
1532714 | 1534226 | + | 1513 | 17544719 | RS05737 | - | 16S ribosomal RNA |
1534293 | 1534369 | + | 77 | 17544719 | RS05732 | - | 14 Ile tRNA |
1534406 | 1534481 | + | 76 | 17544719 | RS05733 | - | 02 Ala tRNA |
1534736 | 1537553 | + | 2818 | 17544719 | RS05738 | - | 23S ribosomal RNA |
1537733 | 1537846 | + | 114 | 17544719 | RS05739 | - | 5S ribosomal RNA |
1645665 | 1645741 | + | 77 | 17544719 | RS03760 | - | 03 Pro tRNA |
1671069 | 1671145 | - | 77 | 17544719 | RS05228 | - | 11 Arg tRNA |
1692085 | 1692161 | + | 77 | 17544719 | RS05795 | - | Xaa tRNA |
1700427 | 1700503 | + | 77 | 17544719 | RS03937 | - | 03 Pro tRNA |
1737456 | 1737532 | - | 77 | 17544719 | RS03940 | - | 16 Met tRNA |
1737601 | 1737677 | - | 77 | 17544719 | RS03939 | - | 16 Met tRNA |
1781710 | 1781796 | + | 87 | 17544719 | RS03938 | - | 15 Leu tRNA |
1833444 | 1833519 | + | 76 | 17544719 | RS02886 | - | 13 Val tRNA |
1833565 | 1833641 | + | 77 | 17544719 | RS02887 | - | 06 Asp tRNA |
2056202 | 2056276 | - | 75 | 17544719 | RS03462 | - | 13 Val tRNA |
2084367 | 2084457 | + | 91 | 17544719 | RS03460 | - | 08 Ser tRNA |
2236103 | 2236187 | - | 85 | 17544719 | RS03461 | - | 15 Leu tRNA |
2306303 | 2306378 | + | 76 | 17544719 | RS01506 | - | 12 Thr tRNA |
2335078 | 2335154 | + | 77 | 17544719 | RS01507 | - | 11 Arg tRNA |
2344958 | 2345047 | + | 90 | 17544719 | RS01508 | - | 08 Ser tRNA |
2399619 | 2399694 | - | 76 | 17544719 | RS01505 | - | 16 Met tRNA |
2534639 | 2534728 | - | 90 | 17544719 | RS01162 | - | 08 Ser tRNA |
2634813 | 2634897 | + | 85 | 17544719 | RS02662 | - | 15 Leu tRNA |
3036735 | 3036811 | + | 77 | 17544719 | RS00236 | - | 03 Pro tRNA |
3095788 | 3101461 | - | 5674 | 17544719 | RSc2871.1 | - | |
3095880 | 3095993 | - | 114 | 17544719 | RS00493 | - | 5S ribosomal RNA |
3096173 | 3098990 | - | 2818 | 17544719 | RS00482 | - | 23S ribosomal RNA |
3099245 | 3099320 | - | 76 | 17544719 | RS00330 | - | 02 Ala tRNA |
3099357 | 3099433 | - | 77 | 17544719 | RS00235 | - | 14 Ile tRNA |
3099500 | 3101012 | - | 1513 | 17544719 | RS00481 | - | 16S ribosomal RNA |
3156294 | 3156369 | - | 76 | 17544719 | RS00327 | - | 12 Thr tRNA |
3271694 | 3271769 | - | 76 | 17544719 | RS04716 | - | 20 Trp tRNA |
3273093 | 3273167 | - | 75 | 17544719 | RS05587 | - | 12 Thr tRNA |
3273188 | 3273261 | - | 74 | 17544719 | RS05586 | - | 01 Gly tRNA |
3273319 | 3273404 | - | 86 | 17544719 | RS05585 | - | 18 Tyr tRNA |
3273998 | 3279671 | + | 5674 | 17544719 | RSc3042.1 | - | |
3274090 | 3274203 | - | 114 | 17544719 | RS05582 | - | 5S ribosomal RNA |
3274322 | 3277200 | - | 2879 | 17544719 | RS05581 | - | 23S ribosomal RNA |
3277455 | 3277530 | - | 76 | 17544719 | RS05584 | - | 02 Ala tRNA Неверная идентификация |
3277567 | 3277643 | - | 77 | 17544719 | RS05583 | - | 02 Ala tRNA |
3277704 | 3279237 | - | 1534 | 17544719 | RS05580 | - | 16S ribosomal RNA |
3322311 | 3322386 | + | 76 | 17544719 | RS00484 | - | 11 Arg tRNA |
3508439 | 3508514 | - | 76 | 17544719 | RS02400 | - | 02 Ala tRNA |