Материалы:NC 003304

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Это исходный материал (как правило загружен ботом)

Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_003304            2841490 bp    DNA     circular BCT 06-AUG-2007
   DEFINITION  Agrobacterium tumefaciens str. C58 chromosome circular, complete
               sequence.
   ACCESSION   NC_003304
   VERSION     NC_003304.1  GI:17933925
   KEYWORDS    .
   SOURCE      Agrobacterium tumefaciens str. C58
     ORGANISM  Agrobacterium tumefaciens str. C58
               Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
               Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
   REFERENCE   1  (bases 1 to 2841490)
     AUTHORS   Wood,D.W., Setubal,J.C., Kaul,R., Monks,D., Chen,L., Wood,G.E.,
               Chen,Y., Woo,L., Kitajima,J.P., Okura,V.K., Almeida,N.F. Jr.,
               Zhou,Y., Bovee,D. Sr., Chapman,P., Clendenning,J., Deatherage,G.,
               Gillet,W., Grant,C., Guenthner,D., Kutyavin,T., Levy,R., Li,M.,
               McClelland,E., Palmieri,A., Raymond,C., Rouse,G.,
               Saenphimmachak,C., Wu,Z., Gordon,D., Eisen,J.A., Paulsen,I.,
               Karp,P., Romero,P., Zhang,S., Yoo,H., Tao,Y., Biddle,P., Jung,M.,
               Krespan,W., Perry,M., Gordon-Kamm,B., Liao,L., Kim,S., Hendrick,C.,
               Zhao,Z., Dolan,M., Tingey,S.V., Tomb,J., Gordon,M.P., Olson,M.V.
               and Nester,E.W.
     TITLE     The genome of the natural genetic engineer Agrobacterium
               tumefaciens C58
     JOURNAL   Science 294 (5550), 2317-2323 (2001)
      PUBMED   11743193
   REFERENCE   2  (bases 1 to 2841490)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2841490)
     CONSRTM   NCBI Microbial Genomes Annotation Project
     TITLE     Direct Submission
     JOURNAL   Submitted (25-JUN-2001) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE008688.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
56740	58231	+	1492	17933925	Atu0053	-	SSU 16S ribosomal RNA
58553	58632	+	80	17933925	Atu0054	-	^{14 Ile tRNA}
58688	58766	+	79	17933925	Atu0055	-	^{02 Ala tRNA}
59719	61975	+	2257	17933925	Atu0057	-	SSU 23S ribosomal RNA
62606	62728	+	123	17933925	Atu0059	-	SSU 5S ribosomal RNA
62964	63043	+	80	17933925	Atu0060	-	^{16 Met tRNA}
128410	128502	-	93	17933925	Atu0123	-	^{08 Ser tRNA}
230828	230917	-	90	17933925	Atu0227	-	^{15 Leu tRNA}
382706	382785	+	80	17933925	Atu0389	-	^{11 Arg tRNA}
411072	411150	-	79	17933925	Atu0414	-	^{12 Thr tRNA}
430676	430752	+	77	17933925	Atu0435	-	^{01 Gly tRNA}
496312	496390	+	79	17933925	Atu0505	-	^{17 Phe tRNA}
531671	531748	+	78	17933925	Atu0541	-	^{12 Thr tRNA}
606854	606933	+	80	17933925	Atu0616	-	^{09 His tRNA}
809486	809563	+	78	17933925	Atu0808	-	^{05 Gln tRNA}
813139	813218	+	80	17933925	Atu0814	-	^{03 Pro tRNA}
1010919	1011012	+	94	17933925	Atu1017	-	^{08 Ser tRNA}
1184653	1184739	-	87	17933925	Atu1193	-	^{15 Leu tRNA}
1217028	1217105	-	78	17933925	Atu1224	-	^{07 Asn tRNA}
1221026	1221105	-	80	17933925	Atu1231	-	^{03 Pro tRNA}
1254976	1255054	-	79	17933925	Atu1265	-	^{13 Val tRNA}
1255500	1255579	+	80	17933925	Atu1266	-	^{06 Asp tRNA}
1255618	1255697	+	80	17933925	Atu1267	-	^{06 Asp tRNA}
1491741	1491833	-	93	17933925	Atu1502	-	^{08 Ser tRNA}
1543274	1543361	-	88	17933925	Atu1555	-	^{15 Leu tRNA}
1567172	1567249	+	78	17933925	Atu1583	-	^{04 Glu tRNA}
1567699	1567776	+	78	17933925	Atu1585	-	^{04 Glu tRNA}
1623521	1623599	+	79	17933925	Atu1635	-	^{10 Lys tRNA}
1652327	1652412	-	86	17933925	Atu1665	-	^{15 Leu tRNA}
1710987	1711063	-	77	17933925	Atu1723	-	^{19 Cys tRNA}
1784211	1784289	+	79	17933925	Atu1797	-	^{10 Lys tRNA}
1791622	1791701	-	80	17933925	Atu1809	-	^{03 Pro tRNA}
1792319	1792398	+	80	17933925	Atu1811	-	^{11 Arg tRNA}
1935049	1935127	-	79	17933925	Atu1964	-	^{20 Trp tRNA}
1956679	1956755	-	77	17933925	Atu1991	-	^{01 Gly tRNA}
1956778	1956865	-	88	17933925	Atu1992	-	^{18 Tyr tRNA}
1970023	1970101	-	79	17933925	Atu2009	-	^{12 Thr tRNA}
2007140	2007475	+	336	17933925	Atu2049	-	tmRNA
2073446	2073847	-	402	17933925	Atu2109	-	RNAase P RNA (rnpB)
2128396	2128474	-	79	17933925	Atu2161	-	^{16 Met tRNA}
2330045	2330124	+	80	17933925	Atu2355	-	^{11 Arg tRNA}
2446471	2446548	+	78	17933925	Atu2479	-	^{01 Gly tRNA}
2512232	2512311	-	80	17933925	Atu2539	-	^{16 Met tRNA}
2512547	2512669	-	123	17933925	Atu2540	-	SSU 5S ribosomal RNA
2513300	2515556	-	2257	17933925	Atu2542	-	SSU 23S ribosomal RNA
2516509	2516587	-	79	17933925	Atu2545	-	^{02 Ala tRNA}
2516643	2516722	-	80	17933925	Atu2546	-	^{14 Ile tRNA}
2517044	2518535	-	1492	17933925	Atu2547	-	SSU 16S ribosomal RNA