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Материалы:NC 004459

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   LOCUS       NC_004459            3281944 bp    DNA     circular BCT 22-NOV-2006
   DEFINITION  Vibrio vulnificus CMCP6 chromosome I, complete sequence.
   ACCESSION   NC_004459
   VERSION     NC_004459.2  GI:117956319
   KEYWORDS    .
   SOURCE      Vibrio vulnificus CMCP6
     ORGANISM  Vibrio vulnificus CMCP6
               Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
               Vibrionaceae; Vibrio.
   REFERENCE   1  (bases 1 to 3281944)
     AUTHORS   Kim,Y.R., Lee,S.E., Kim,C.M., Kim,S.Y., Shin,E.K., Shin,D.H.,
               Chung,S.S., Choy,H.E., Progulske-Fox,A., Hillman,J.D., Handfield,M.
               and Rhee,J.H.
     TITLE     Characterization and Pathogenic Significance of Vibrio vulnificus
               Antigens Preferentially Expressed in Septicemic Patients
     JOURNAL   Infect. Immun. 71 (10), 5461-5471 (2003)
      PUBMED   14500463
   REFERENCE   2  (bases 1 to 3281944)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 3281944)
     AUTHORS   Jeong,H., Moon,Y.H. and Kim,J.J.
     TITLE     Direct Submission
     JOURNAL   Submitted (13-DEC-2002) Daedeok BioCommunity, 461-6, Jeonmin-dong,
               Yuseong-gu, Daejeon 305-811, South Korea
   REFERENCE   4  (bases 1 to 3281944)
     AUTHORS   Rhee,J.H., Kim,S.Y., Chung,S.S., Lee,S.E. and Choy,H.E.
     TITLE     Direct Submission
     JOURNAL   Submitted (13-DEC-2002) Department of Microbiology, Genome Research
               Center for Enteropathogenic Bacteria, Chonnam National University
               Medical College, Hak-1-Dong, Dong-Gu, Kwang-Ju 501-746, South Korea
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE016795.
               On Nov 14, 2006 this sequence version replaced gi:27363490.
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
68368 68441 + 74 117956319 VV1_tRNAPro1 - 03 Pro tRNA
225719 225792 + 74 117956319 VV1_tRNAArg1 - 11 Arg tRNA
237944 238017 - 74 117956319 VV1_tRNAPro4 - 03 Pro tRNA
253124 253197 + 74 117956319 VV1_tRNAMet1 - 16 Met tRNA
253239 253320 + 82 117956319 VV1_tRNALeu1 - 15 Leu tRNA
253334 253405 + 72 117956319 VV1_tRNAGln1 - 05 Gln tRNA
253486 253559 + 74 117956319 VV1_tRNAMet2 - 16 Met tRNA
253605 253686 + 82 117956319 VV1_tRNALeu2 - 15 Leu tRNA
253744 253815 + 72 117956319 VV1_tRNAGln2 - 05 Gln tRNA
253864 253945 + 82 117956319 VV1_tRNALeu3 - 15 Leu tRNA
253960 254033 + 74 117956319 VV1_tRNAMet3 - 16 Met tRNA
254081 254162 + 82 117956319 VV1_tRNALeu4 - 15 Leu tRNA
254220 254291 + 72 117956319 VV1_tRNAPseudo1 - Xaa tRNA
254341 254422 + 82 117956319 VV1_tRNALeu5 - 15 Leu tRNA
254481 254552 + 72 117956319 VV1_tRNAGln3 - 05 Gln tRNA
254601 254682 + 82 117956319 VV1_tRNALeu6 - 15 Leu tRNA
254742 254813 + 72 117956319 VV1_tRNAGln4 - 05 Gln tRNA
254861 254942 + 82 117956319 VV1_tRNALeu7 - 15 Leu tRNA
471902 471975 - 74 117956319 VV1_tRNATrp2 - 20 Trp tRNA
472048 472121 - 74 117956319 VV1_tRNAAsp6 - 06 Asp tRNA
472150 472270 - 121 117956319 VV1_r01 - 5S ribosomal RNA
472382 475281 - 2900 117956319 VV1_r02 - 23S ribosomal RNA
475561 475633 - 73 117956319 VV1_tRNAAla5 - 02 Ala tRNA
475699 477240 - 1542 117956319 VV1_r03 - 16S ribosomal RNA
650109 650181 + 73 117956319 VV1_tRNAMet4 - 16 Met tRNA
928223 928296 - 74 117956319 VV1_tRNAAsp5 - 06 Asp tRNA
928326 928446 - 121 117956319 VV1_r04 - 5S ribosomal RNA
928558 931456 - 2899 117956319 VV1_r05 - 23S ribosomal RNA
931797 931869 - 73 117956319 VV1_tRNAVal5 - 13 Val tRNA
931887 931959 - 73 117956319 VV1_tRNAAla4 - 02 Ala tRNA
931977 932049 - 73 117956319 VV1_tRNALys3 - 10 Lys tRNA
932054 932126 - 73 117956319 VV1_tRNAGlu4 - 04 Glu tRNA
932194 933735 - 1542 117956319 VV1_r06 - 16S ribosomal RNA
934065 934184 - 120 117956319 VV1_r07 - 5S ribosomal RNA
934296 937194 - 2899 117956319 VV1_r08 - 23S ribosomal RNA
937475 937547 - 73 117956319 VV1_tRNAAla3 - 02 Ala tRNA
937561 937634 - 74 117956319 VV1_tRNAIle3 - 14 Ile tRNA
937697 939238 - 1542 117956319 VV1_r09 - 16S ribosomal RNA
974664 974737 - 74 117956319 VV1_tRNAAsp4 - 06 Asp tRNA
974767 974887 - 121 117956319 VV1_r10 - 5S ribosomal RNA
974999 977897 - 2899 117956319 VV1_r11 - 23S ribosomal RNA
978179 978251 - 73 117956319 VV1_tRNAAla2 - 02 Ala tRNA
978265 978338 - 74 117956319 VV1_tRNAIle2 - 14 Ile tRNA
978401 979942 - 1542 117956319 VV1_r12 - 16S ribosomal RNA
1060774 1062317 + 1544 117956319 VV1_r13 - 16S ribosomal RNA
1062385 1062457 + 73 117956319 VV1_tRNAGlu1 - 04 Glu tRNA
1062462 1062534 + 73 117956319 VV1_tRNALys1 - 10 Lys tRNA
1062566 1062638 + 73 117956319 VV1_tRNAVal1 - 13 Val tRNA
1062918 1065816 + 2899 117956319 VV1_r14 - 23S ribosomal RNA
1065928 1066048 + 121 117956319 VV1_r15 - 5S ribosomal RNA
1066149 1066236 + 88 117956319 VV1_tRNASer1 - 08 Ser tRNA
1078372 1078445 + 74 117956319 VV1_tRNAArg2 - 11 Arg tRNA
1078487 1078559 + 73 117956319 VV1_tRNAHis1 - 09 His tRNA
1078589 1078662 + 74 117956319 VV1_tRNAPro2 - 03 Pro tRNA
1078740 1078812 + 73 117956319 VV1_tRNAHis2 - 09 His tRNA
1078840 1078913 + 74 117956319 VV1_tRNAPro3 - 03 Pro tRNA
1170288 1171829 + 1542 117956319 VV1_r16 - 16S ribosomal RNA
1171897 1171969 + 73 117956319 VV1_tRNAGlu2 - 04 Glu tRNA
1171974 1172046 + 73 117956319 VV1_tRNALys2 - 10 Lys tRNA
1172078 1172150 + 73 117956319 VV1_tRNAVal2 - 13 Val tRNA
1172429 1175327 + 2899 117956319 VV1_r17 - 23S ribosomal RNA
1175439 1175559 + 121 117956319 VV1_r18 - 5S ribosomal RNA
1175589 1175662 + 74 117956319 VV1_tRNAAsp1 - 06 Asp tRNA
1181970 1182042 + 73 117956319 VV1_tRNAThr1 - 12 Thr tRNA
1182093 1182174 + 82 117956319 VV1_tRNATyr1 - 18 Tyr tRNA
1182213 1182284 + 72 117956319 VV1_tRNAGly1 - 01 Gly tRNA
1182302 1182374 + 73 117956319 VV1_tRNAThr2 - 12 Thr tRNA
1271824 1271896 + 73 117956319 VV1_tRNAGly2 - 01 Gly tRNA
1271933 1272005 + 73 117956319 VV1_tRNAGly3 - 01 Gly tRNA
1272042 1272114 + 73 117956319 VV1_tRNAGly4 - 01 Gly tRNA
1272151 1272223 + 73 117956319 VV1_tRNAGly5 - 01 Gly tRNA
1272261 1272333 + 73 117956319 VV1_tRNAGly6 - 01 Gly tRNA
1272393 1272466 + 74 117956319 VV1_tRNAMet5 - 16 Met tRNA
1272512 1272585 + 74 117956319 VV1_tRNAMet6 - 16 Met tRNA
1272630 1272703 + 74 117956319 VV1_tRNAMet7 - 16 Met tRNA
1272749 1272822 + 74 117956319 VV1_tRNAMet8 - 16 Met tRNA
1389749 1391290 + 1542 117956319 VV1_r19 - 16S ribosomal RNA
1391358 1391430 + 73 117956319 VV1_tRNAGlu3 - 04 Glu tRNA
1391709 1394607 + 2899 117956319 VV1_r20 - 23S ribosomal RNA
1394719 1394839 + 121 117956319 VV1_r21 - 5S ribosomal RNA
1394868 1394941 + 74 117956319 VV1_tRNAAsp2 - 06 Asp tRNA
1394998 1395071 + 74 117956319 VV1_tRNATrp1 - 20 Trp tRNA
1468795 1468876 + 82 117956319 VV1_tRNALeu8 - 15 Leu tRNA
1478334 1479875 + 1542 117956319 VV1_r22 - 16S ribosomal RNA
1479938 1480011 + 74 117956319 VV1_tRNAIle1 - 14 Ile tRNA
1480025 1480097 + 73 117956319 VV1_tRNAAla1 - 02 Ala tRNA
1480378 1483276 + 2899 117956319 VV1_r23 - 23S ribosomal RNA
1483352 1483472 + 121 117956319 VV1_r24 - 5S ribosomal RNA
1483520 1483592 + 73 117956319 VV1_tRNAThr3 - 12 Thr tRNA
1483601 1483720 + 120 117956319 VV1_r25 - 5S ribosomal RNA
1483783 1483856 + 74 117956319 VV1_tRNAAsp3 - 06 Asp tRNA
1485722 1485794 - 73 117956319 VV1_tRNAAsn4 - 07 Asn tRNA
1485838 1485910 - 73 117956319 VV1_tRNAThr6 - 12 Thr tRNA
1485949 1486021 - 73 117956319 VV1_tRNAAsn3 - 07 Asn tRNA
1486064 1486136 - 73 117956319 VV1_tRNAPhe3 - 17 Phe tRNA
1486147 1486219 - 73 117956319 VV1_tRNAThr5 - 12 Thr tRNA
1486281 1486353 - 73 117956319 VV1_tRNAPhe2 - 17 Phe tRNA
1488451 1488523 - 73 117956319 VV1_tRNAAsn2 - 07 Asn tRNA
1488541 1488613 - 73 117956319 VV1_tRNAThr4 - 12 Thr tRNA
1488671 1488743 - 73 117956319 VV1_tRNAPhe1 - 17 Phe tRNA
1570221 1570310 + 90 117956319 VV1_tRNASer2 - 08 Ser tRNA
1570343 1570416 + 74 117956319 VV1_tRNAArg3 - 11 Arg tRNA
1570443 1570531 + 89 117956319 VV1_tRNASer3 - 08 Ser tRNA
1570619 1570692 + 74 117956319 VV1_tRNAArg4 - 11 Arg tRNA
1570786 1570859 + 74 117956319 VV1_tRNAArg5 - 11 Arg tRNA
1570907 1570980 + 74 117956319 VV1_tRNAArg6 - 11 Arg tRNA
1571073 1571146 + 74 117956319 VV1_tRNAArg7 - 11 Arg tRNA
1571192 1571265 + 74 117956319 VV1_tRNAArg8 - 11 Arg tRNA
1676904 1676984 + 81 117956319 VV1_tRNALeu9 - 15 Leu tRNA
1677045 1677118 + 74 117956319 VV1_tRNAMet9 - 16 Met tRNA
2015574 2015647 + 74 117956319 VV1_tRNAArg9 - 11 Arg tRNA
2184013 2184097 + 85 117956319 VV1_tRNASer4 - 08 Ser tRNA
2825056 2825129 - 74 117956319 VV1_tRNAVal4 - 13 Val tRNA
2825168 2825241 - 74 117956319 VV1_tRNAVal3 - 13 Val tRNA
3120610 3120682 - 73 117956319 VV1_tRNAGly8 - 01 Gly tRNA
3120711 3120794 - 84 117956319 VV1_tRNALeu10 - 15 Leu tRNA
3120858 3120930 - 73 117956319 VV1_tRNAGly7 - 01 Gly tRNA
3120937 3121007 - 71 117956319 VV1_tRNACys1 - 19 Cys tRNA
3161985 3162057 + 73 117956319 VV1_tRNAAsn1 - 07 Asn tRNA
3191763 3191850 + 88 117956319 VV1_tRNASer5 - 08 Ser tRNA
3235765 3235846 + 82 117956319 VV1_tRNATyr2 - 18 Tyr tRNA
3235940 3236021 + 82 117956319 VV1_tRNATyr3 - 18 Tyr tRNA
3236115 3236196 + 82 117956319 VV1_tRNATyr4 - 18 Tyr tRNA