Геном прокариот/Материалы:NC 004572

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_004572             927303 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Tropheryma whipplei str. Twist, complete genome.
   ACCESSION   NC_004572
   VERSION     NC_004572.3  GI:32447382
   KEYWORDS    .
   SOURCE      Tropheryma whipplei str. Twist
     ORGANISM  Tropheryma whipplei str. Twist
               Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
               Micrococcineae; Cellulomonadaceae; Tropheryma.
   REFERENCE   1  (bases 1 to 927303)
     AUTHORS   Raoult,D., Ogata,H., Audic,S., Robert,C., Suhre,K., Drancourt,M.
               and Claverie,J.M.
     TITLE     Tropheryma whipplei Twist: A Human Pathogenic Actinobacteria With a
               Reduced Genome
     JOURNAL   Genome Res. 13 (8), 1800-1809 (2003)
      PUBMED   12902375
   REFERENCE   2  (bases 1 to 927303)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 927303)
     AUTHORS   Raoult,D., Audic,S., Robert,C., Ogata,H., Suhre,K., Drancourt,M.
               and Claverie,J.-M.
     TITLE     Direct Submission
     JOURNAL   Submitted (26-JUL-2002) Unite des Rickettsies, Faculte de Medecine,
               CNRS UMR 6020, IFR 48, Universite de la Mediterranee, 27 boulevard
               Jean Moulin, Marseille Cedex 05 13385, France
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE014184.
               On Jul 3, 2003 this sequence version replaced gi:31340554.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
9278	9351	+	74	32447382	TWTRNA01	-	^{14 Ile tRNA}
9365	9441	+	77	32447382	TWTRNA02	-	^{02 Ala tRNA}
61998	62074	-	77	32447382	TWTRNA03	-	^{16 Met tRNA}
62093	62164	-	72	32447382	TWTRNA04	-	^{12 Thr tRNA}
62733	62815	-	83	32447382	TWTRNA05	-	^{18 Tyr tRNA}
106403	106479	-	77	32447382	TWTRNA06	-	^{03 Pro tRNA}
131120	131206	+	87	32447382	TWTRNA07	-	^{08 Ser tRNA}
185163	185238	-	76	32447382	TWTRNA08	-	^{17 Phe tRNA}
185244	185317	-	74	32447382	TWTRNA09	-	^{06 Asp tRNA}
185327	185402	-	76	32447382	TWTRNA10	-	^{04 Glu tRNA}
213475	214999	+	1525	32447382	TWTRNA11	-	16S ribosomal RNA
215293	218394	+	3102	32447382	TWTRNA12	-	23S ribosomal RNA
218447	218566	+	120	32447382	TWTRNA13	-	5S ribosomal RNA
278117	278485	+	369	32447382	TWTRNA14	-	tmRNA
281126	281201	+	76	32447382	TWTRNA15	-	^{10 Lys tRNA}
294045	294116	+	72	32447382	TWTRNA16	-	^{05 Gln tRNA}
340634	340707	+	74	32447382	TWTRNA17	-	^{13 Val tRNA}
342277	342627	+	351	32447382	TWTRNA18	-	RNA subunit (M1 RNA) of ribonuclease P
371436	371508	+	73	32447382	TWTRNA19	-	^{07 Asn tRNA}
372496	372567	+	72	32447382	TWTRNA20	-	^{11 Arg tRNA}
374146	374231	-	86	32447382	TWTRNA21	-	^{15 Leu tRNA}
397744	397830	+	87	32447382	TWTRNA22	-	^{15 Leu tRNA}
414168	414241	-	74	32447382	TWTRNA23	-	^{16 Met tRNA}
428946	429018	-	73	32447382	TWTRNA24	-	^{12 Thr tRNA}
436472	436547	+	76	32447382	TWTRNA25	-	^{11 Arg tRNA}
480920	480991	+	72	32447382	TWTRNA26	-	^{01 Gly tRNA}
481036	481106	+	71	32447382	TWTRNA27	-	^{19 Cys tRNA}
481122	481193	+	72	32447382	TWTRNA28	-	^{13 Val tRNA}
481241	481312	+	72	32447382	TWTRNA29	-	^{13 Val tRNA}
495779	495851	-	73	32447382	TWTRNA30	-	^{09 His tRNA}
496696	496768	+	73	32447382	TWTRNA31	-	^{11 Arg tRNA}
557615	557690	-	76	32447382	TWTRNA32	-	^{02 Ala tRNA}
576789	576862	-	74	32447382	TWTRNA33	-	^{03 Pro tRNA}
587187	587260	-	74	32447382	TWTRNA34	-	^{02 Ala tRNA}
610152	610224	-	73	32447382	TWTRNA35	-	^{04 Glu tRNA}
702277	702352	+	76	32447382	TWTRNA36	-	^{04 Glu tRNA}
702362	702435	+	74	32447382	TWTRNA37	-	^{06 Asp tRNA}
702441	702516	+	76	32447382	TWTRNA38	-	^{17 Phe tRNA}
707474	707544	+	71	32447382	TWTRNA39	-	^{05 Gln tRNA}
726656	726736	+	81	32447382	TWTRNA40	-	^{15 Leu tRNA}
730744	730815	+	72	32447382	TWTRNA41	-	^{04 Glu tRNA}
730821	730896	+	76	32447382	TWTRNA42	-	^{17 Phe tRNA}
734524	734597	-	74	32447382	TWTRNA43	-	^{16 Met tRNA}
773514	773586	-	73	32447382	TWTRNA44	-	^{10 Lys tRNA}
805858	805931	-	74	32447382	TWTRNA45	-	^{12 Thr tRNA}
820306	820379	+	74	32447382	TWTRNA46	-	^{03 Pro tRNA}
828367	828439	-	73	32447382	TWTRNA47	-	^{20 Trp tRNA}
839182	839266	+	85	32447382	TWTRNA48	-	^{08 Ser tRNA}
840527	840615	+	89	32447382	TWTRNA49	-	^{08 Ser tRNA}
840640	840712	+	73	32447382	TWTRNA50	-	^{11 Arg tRNA}
888123	888207	+	85	32447382	TWTRNA51	-	^{08 Ser tRNA}
889338	889421	-	84	32447382	TWTRNA52	-	^{15 Leu tRNA}
897599	897672	-	74	32447382	TWTRNA53	-	^{15 Leu tRNA}
904638	904711	+	74	32447382	TWTRNA54	-	^{01 Gly tRNA}