Материалы:NC 006905
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LOCUS NC_006905 4755700 bp DNA circular BCT 12-MAR-2007 DEFINITION Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome. ACCESSION NC_006905 VERSION NC_006905.1 GI:62178570 KEYWORDS . SOURCE Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 ORGANISM Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella; Salmonella enterica subsp. enterica serovar Choleraesuis. REFERENCE 1 (bases 1 to 4755700) AUTHORS Chiu,C.H., Tang,P., Chu,C., Hu,S., Bao,Q., Yu,J., Chou,Y.Y., Wang,H.S. and Lee,Y.S. TITLE The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen JOURNAL Nucleic Acids Res. 33 (5), 1690-1698 (2005) PUBMED 15781495 REFERENCE 2 (bases 1 to 4755700) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-APR-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4755700) AUTHORS Chiu,C.-H., Tang,P., Chu,C., Bao,Q., Hu,S., Yu,J., Chou,Y.-Y., Wang,H.-S. and Lee,Y.-S. TITLE Direct Submission JOURNAL Submitted (03-SEP-2004) Chang Gung Genomic Medical Center, No. 5, Fu-Shing St., Kweishan, Taoyuan 333, Taiwan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AE017220. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
285178 | 286711 | + | 1534 | 62178570 | SC16Sr1 | - | 16S ribosomal RNA |
286782 | 286858 | + | 77 | 62178570 | SCTRNA1 | - | 14 Ile tRNA |
286968 | 287043 | + | 76 | 62178570 | SCTRNA2 | - | 02 Ala tRNA |
287224 | 290231 | + | 3008 | 62178570 | SC23Sr1 | - | 23S ribosomal RNA |
290427 | 290546 | + | 120 | 62178570 | SC5Sr1 | - | 5S ribosomal RNA |
290736 | 290812 | + | 77 | 62178570 | SCTRNA3 | - | 06 Asp tRNA |
300176 | 300252 | + | 77 | 62178570 | SCTRNA4 | - | 06 Asp tRNA |
372757 | 372832 | + | 76 | 62178570 | SCTRNA5 | - | 12 Thr tRNA |
390965 | 391039 | + | 75 | 62178570 | SCTRNA6 | - | 07 Asn tRNA |
391045 | 391120 | + | 76 | 62178570 | SCTRNA7 | - | 12 Thr tRNA |
659248 | 659324 | + | 77 | 62178570 | SCTRNA8 | - | 11 Arg tRNA |
779895 | 779969 | - | 75 | 62178570 | SCTRNA9 | - | 05 Gln tRNA |
780013 | 780087 | - | 75 | 62178570 | SCTRNA10 | - | 05 Gln tRNA |
780134 | 780210 | - | 77 | 62178570 | SCTRNA11 | - | 16 Met tRNA |
780226 | 780300 | - | 75 | 62178570 | SCTRNA12 | - | 05 Gln tRNA |
780336 | 780410 | - | 75 | 62178570 | SCTRNA13 | - | 05 Gln tRNA |
780434 | 780518 | - | 85 | 62178570 | SCTRNA14 | - | 15 Leu tRNA |
780527 | 780603 | - | 77 | 62178570 | SCTRNA15 | - | 16 Met tRNA |
847792 | 847867 | + | 76 | 62178570 | SCTRNA16 | - | 10 Lys tRNA |
848004 | 848079 | + | 76 | 62178570 | SCTRNA17 | - | 13 Val tRNA |
848083 | 848158 | + | 76 | 62178570 | SCTRNA18 | - | 10 Lys tRNA |
848298 | 848373 | + | 76 | 62178570 | SCTRNA19 | - | 10 Lys tRNA |
848508 | 848583 | + | 76 | 62178570 | SCTRNA20 | - | 10 Lys tRNA |
1011374 | 1011461 | - | 88 | 62178570 | SCTRNA21 | - | 08 Ser tRNA |
1155936 | 1156023 | + | 88 | 62178570 | SCTRNA22 | - | 08 Ser tRNA |
1204828 | 1204915 | - | 88 | 62178570 | SCTRNA23 | - | 08 Ser tRNA |
1364833 | 1364909 | + | 77 | 62178570 | SCTRNA24 | - | 11 Arg tRNA |
1377276 | 1377352 | + | 77 | 62178570 | SCTRNA25 | - | 11 Arg tRNA |
1539335 | 1539411 | - | 77 | 62178570 | SCTRNA26 | - | 13 Val tRNA |
1539422 | 1539498 | - | 77 | 62178570 | SCTRNA27 | - | 13 Val tRNA |
1865694 | 1865778 | + | 85 | 62178570 | SCTRNA28 | - | 18 Tyr tRNA |
1865996 | 1866080 | + | 85 | 62178570 | SCTRNA29 | - | 18 Tyr tRNA |
2057826 | 2057912 | - | 87 | 62178570 | SCTRNA30 | - | 15 Leu tRNA |
2057924 | 2057997 | - | 74 | 62178570 | SCTRNA31 | - | 19 Cys tRNA |
2058050 | 2058125 | - | 76 | 62178570 | SCTRNA32 | - | 01 Gly tRNA |
2103908 | 2103997 | - | 90 | 62178570 | SCTRNA33 | - | 08 Ser tRNA |
2104984 | 2105059 | + | 76 | 62178570 | SCTRNA34 | - | 07 Asn tRNA |
2105954 | 2106029 | + | 76 | 62178570 | SCTRNA35 | - | 07 Asn tRNA |
2115901 | 2115976 | - | 76 | 62178570 | SCTRNA36 | - | 07 Asn tRNA |
2117734 | 2117809 | + | 76 | 62178570 | SCTRNA37 | - | 07 Asn tRNA |
2354604 | 2354680 | + | 77 | 62178570 | SCTRNA38 | - | 03 Pro tRNA |
2520234 | 2520308 | + | 75 | 62178570 | SCTRNA39 | - | 11 Arg tRNA |
2544665 | 2544740 | - | 76 | 62178570 | SCTRNA40 | - | 02 Ala tRNA |
2544783 | 2544858 | - | 76 | 62178570 | SCTRNA41 | - | 02 Ala tRNA |
2547564 | 2547639 | + | 76 | 62178570 | SCTRNA42 | - | 13 Val tRNA |
2547685 | 2547760 | + | 76 | 62178570 | SCTRNA43 | - | 13 Val tRNA |
2547765 | 2547840 | + | 76 | 62178570 | SCTRNA44 | - | 10 Lys tRNA |
2813881 | 2814000 | - | 120 | 62178570 | SC5Sr2 | - | 5S ribosomal RNA |
2814092 | 2816996 | - | 2905 | 62178570 | SC23Sr2 | - | 23S ribosomal RNA |
2817186 | 2817262 | - | 77 | 62178570 | SCTRNA45 | - | 04 Glu tRNA |
2817349 | 2818892 | - | 1544 | 62178570 | SC16Sr2 | - | 16S ribosomal RNA |
2924470 | 2924546 | - | 77 | 62178570 | SCTRNA46 | - | 11 Arg tRNA |
2924609 | 2924685 | - | 77 | 62178570 | SCTRNA47 | - | 11 Arg tRNA |
2924748 | 2924824 | - | 77 | 62178570 | SCTRNA48 | - | 11 Arg tRNA |
2924886 | 2924962 | - | 77 | 62178570 | SCTRNA49 | - | 11 Arg tRNA |
2924966 | 2925058 | - | 93 | 62178570 | SCTRNA50 | - | 08 Ser tRNA |
3100757 | 3100833 | + | 77 | 62178570 | SCTRNA51 | - | 16 Met tRNA |
3100863 | 3100939 | + | 77 | 62178570 | SCTRNA52 | - | 16 Met tRNA |
3155594 | 3155667 | - | 74 | 62178570 | SCTRNA53 | - | 01 Gly tRNA |
3235633 | 3235708 | + | 76 | 62178570 | SCTRNA54 | - | 17 Phe tRNA |
3341071 | 3341146 | + | 76 | 62178570 | SCTRNA55 | - | 16 Met tRNA |
3414530 | 3414606 | - | 77 | 62178570 | SCTRNA56 | - | 16 Met tRNA |
3416491 | 3416577 | - | 87 | 62178570 | SCTRNA57 | - | 15 Leu tRNA |
3521191 | 3521310 | - | 120 | 62178570 | SC5Sr3 | - | 5S ribosomal RNA |
3521348 | 3521423 | - | 76 | 62178570 | SCTRNA58 | - | 12 Thr tRNA |
3521436 | 3521555 | - | 120 | 62178570 | SC5Sr32 | - | 5S ribosomal RNA |
3521647 | 3524553 | - | 2907 | 62178570 | SC23Sr3 | - | 23S ribosomal RNA |
3524745 | 3524820 | - | 76 | 62178570 | SCTRNA59 | - | 04 Glu tRNA |
3524907 | 3526444 | - | 1538 | 62178570 | SC16Sr3 | - | 16S ribosomal RNA |
3771190 | 3771266 | - | 77 | 62178570 | SCTRNA60 | - | 03 Pro tRNA |
3890879 | 3890969 | + | 91 | 62178570 | SCTRNA61 | - | Sec tRNA |
4035209 | 4036742 | + | 1534 | 62178570 | SC16Sr4 | - | 16S ribosomal RNA |
4036813 | 4036889 | + | 77 | 62178570 | SCTRNA62 | - | 14 Ile tRNA |
4036999 | 4037074 | + | 76 | 62178570 | SCTRNA63 | - | 02 Ala tRNA |
4037255 | 4040166 | + | 2912 | 62178570 | SC23Sr4 | - | 23S ribosomal RNA |
4040258 | 4040377 | + | 120 | 62178570 | SC5Sr4 | - | 5S ribosomal RNA |
4040430 | 4040506 | + | 77 | 62178570 | SCTRNA64 | - | 06 Asp tRNA |
4040515 | 4040590 | + | 76 | 62178570 | SCTRNA65 | - | 20 Trp tRNA |
4076704 | 4076780 | + | 77 | 62178570 | SCTRNA66 | - | 11 Arg tRNA |
4076835 | 4076910 | + | 76 | 62178570 | SCTRNA67 | - | 09 His tRNA |
4076931 | 4077017 | + | 87 | 62178570 | SCTRNA68 | - | 15 Leu tRNA |
4077060 | 4077136 | + | 77 | 62178570 | SCTRNA69 | - | 03 Pro tRNA |
4130296 | 4131831 | + | 1536 | 62178570 | SC16Sr5 | - | 16S ribosomal RNA |
4131902 | 4131978 | + | 77 | 62178570 | SCTRNA70 | - | 14 Ile tRNA |
4132088 | 4132163 | + | 76 | 62178570 | SCTRNA71 | - | 02 Ala tRNA |
4132343 | 4135250 | + | 2908 | 62178570 | SC23Sr5 | - | 23S ribosomal RNA |
4135342 | 4135461 | + | 120 | 62178570 | SC5Sr5 | - | 5S ribosomal RNA |
4285504 | 4287037 | + | 1534 | 62178570 | SC16Sr6 | - | 16S ribosomal RNA |
4287124 | 4287199 | + | 76 | 62178570 | SCTRNA72 | - | 04 Glu tRNA |
4287391 | 4290298 | + | 2908 | 62178570 | SC23Sr6 | - | 23S ribosomal RNA |
4290390 | 4290509 | + | 120 | 62178570 | SC5Sr6 | - | 5S ribosomal RNA |
4294063 | 4294138 | + | 76 | 62178570 | SCTRNA73 | - | 12 Thr tRNA |
4294147 | 4294231 | + | 85 | 62178570 | SCTRNA74 | - | 18 Tyr tRNA |
4294348 | 4294422 | + | 75 | 62178570 | SCTRNA75 | - | 01 Gly tRNA |
4294429 | 4294504 | + | 76 | 62178570 | SCTRNA76 | - | 12 Thr tRNA |
4328261 | 4329794 | + | 1534 | 62178570 | SC16Sr7 | - | 16S ribosomal RNA |
4329881 | 4329956 | + | 76 | 62178570 | SCTRNA77 | - | 04 Glu tRNA |
4330148 | 4333054 | + | 2907 | 62178570 | SC23Sr7 | - | 23S ribosomal RNA |
4333146 | 4333265 | + | 120 | 62178570 | SC5Sr7 | - | 5S ribosomal RNA |
4501280 | 4501355 | - | 76 | 62178570 | SCTRNA78 | - | 17 Phe tRNA |
4531119 | 4531194 | + | 76 | 62178570 | SCTRNA79 | - | 01 Gly tRNA |
4531351 | 4531426 | + | 76 | 62178570 | SCTRNA80 | - | 01 Gly tRNA |
4531583 | 4531658 | + | 76 | 62178570 | SCTRNA81 | - | 01 Gly tRNA |
4644987 | 4645071 | + | 85 | 62178570 | SCTRNA82 | - | 15 Leu tRNA |
4712938 | 4713024 | - | 87 | 62178570 | SCTRNA83 | - | 15 Leu tRNA |
4713056 | 4713142 | - | 87 | 62178570 | SCTRNA84 | - | 15 Leu tRNA |
4713170 | 4713256 | - | 87 | 62178570 | SCTRNA85 | - | 15 Leu tRNA |