Материалы:NC 006905

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

LOCUS NC_006905 4755700 bp DNA circular BCT 12-MAR-2007
DEFINITION Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome.
ACCESSION NC_006905
VERSION NC_006905.1 GI:62178570
KEYWORDS .
SOURCE Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
ORGANISM Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Salmonella; Salmonella enterica subsp. enterica
serovar Choleraesuis.
REFERENCE 1 (bases 1 to 4755700)
AUTHORS Chiu,C.H., Tang,P., Chu,C., Hu,S., Bao,Q., Yu,J., Chou,Y.Y.,
Wang,H.S. and Lee,Y.S.
TITLE The genome sequence of Salmonella enterica serovar Choleraesuis, a
highly invasive and resistant zoonotic pathogen
JOURNAL Nucleic Acids Res. 33 (5), 1690-1698 (2005)
PUBMED 15781495
REFERENCE 2 (bases 1 to 4755700)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4755700)
AUTHORS Chiu,C.-H., Tang,P., Chu,C., Bao,Q., Hu,S., Yu,J., Chou,Y.-Y.,
Wang,H.-S. and Lee,Y.-S.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2004) Chang Gung Genomic Medical Center, No. 5,
Fu-Shing St., Kweishan, Taoyuan 333, Taiwan
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017220.
COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
285178	286711	+	1534	62178570	SC16Sr1	-	16S ribosomal RNA
286782	286858	+	77	62178570	SCTRNA1	-	^{14 Ile tRNA}
286968	287043	+	76	62178570	SCTRNA2	-	^{02 Ala tRNA}
287224	290231	+	3008	62178570	SC23Sr1	-	23S ribosomal RNA
290427	290546	+	120	62178570	SC5Sr1	-	5S ribosomal RNA
290736	290812	+	77	62178570	SCTRNA3	-	^{06 Asp tRNA}
300176	300252	+	77	62178570	SCTRNA4	-	^{06 Asp tRNA}
372757	372832	+	76	62178570	SCTRNA5	-	^{12 Thr tRNA}
390965	391039	+	75	62178570	SCTRNA6	-	^{07 Asn tRNA}
391045	391120	+	76	62178570	SCTRNA7	-	^{12 Thr tRNA}
659248	659324	+	77	62178570	SCTRNA8	-	^{11 Arg tRNA}
779895	779969	-	75	62178570	SCTRNA9	-	^{05 Gln tRNA}
780013	780087	-	75	62178570	SCTRNA10	-	^{05 Gln tRNA}
780134	780210	-	77	62178570	SCTRNA11	-	^{16 Met tRNA}
780226	780300	-	75	62178570	SCTRNA12	-	^{05 Gln tRNA}
780336	780410	-	75	62178570	SCTRNA13	-	^{05 Gln tRNA}
780434	780518	-	85	62178570	SCTRNA14	-	^{15 Leu tRNA}
780527	780603	-	77	62178570	SCTRNA15	-	^{16 Met tRNA}
847792	847867	+	76	62178570	SCTRNA16	-	^{10 Lys tRNA}
848004	848079	+	76	62178570	SCTRNA17	-	^{13 Val tRNA}
848083	848158	+	76	62178570	SCTRNA18	-	^{10 Lys tRNA}
848298	848373	+	76	62178570	SCTRNA19	-	^{10 Lys tRNA}
848508	848583	+	76	62178570	SCTRNA20	-	^{10 Lys tRNA}
1011374	1011461	-	88	62178570	SCTRNA21	-	^{08 Ser tRNA}
1155936	1156023	+	88	62178570	SCTRNA22	-	^{08 Ser tRNA}
1204828	1204915	-	88	62178570	SCTRNA23	-	^{08 Ser tRNA}
1364833	1364909	+	77	62178570	SCTRNA24	-	^{11 Arg tRNA}
1377276	1377352	+	77	62178570	SCTRNA25	-	^{11 Arg tRNA}
1539335	1539411	-	77	62178570	SCTRNA26	-	^{13 Val tRNA}
1539422	1539498	-	77	62178570	SCTRNA27	-	^{13 Val tRNA}
1865694	1865778	+	85	62178570	SCTRNA28	-	^{18 Tyr tRNA}
1865996	1866080	+	85	62178570	SCTRNA29	-	^{18 Tyr tRNA}
2057826	2057912	-	87	62178570	SCTRNA30	-	^{15 Leu tRNA}
2057924	2057997	-	74	62178570	SCTRNA31	-	^{19 Cys tRNA}
2058050	2058125	-	76	62178570	SCTRNA32	-	^{01 Gly tRNA}
2103908	2103997	-	90	62178570	SCTRNA33	-	^{08 Ser tRNA}
2104984	2105059	+	76	62178570	SCTRNA34	-	^{07 Asn tRNA}
2105954	2106029	+	76	62178570	SCTRNA35	-	^{07 Asn tRNA}
2115901	2115976	-	76	62178570	SCTRNA36	-	^{07 Asn tRNA}
2117734	2117809	+	76	62178570	SCTRNA37	-	^{07 Asn tRNA}
2354604	2354680	+	77	62178570	SCTRNA38	-	^{03 Pro tRNA}
2520234	2520308	+	75	62178570	SCTRNA39	-	^{11 Arg tRNA}
2544665	2544740	-	76	62178570	SCTRNA40	-	^{02 Ala tRNA}
2544783	2544858	-	76	62178570	SCTRNA41	-	^{02 Ala tRNA}
2547564	2547639	+	76	62178570	SCTRNA42	-	^{13 Val tRNA}
2547685	2547760	+	76	62178570	SCTRNA43	-	^{13 Val tRNA}
2547765	2547840	+	76	62178570	SCTRNA44	-	^{10 Lys tRNA}
2813881	2814000	-	120	62178570	SC5Sr2	-	5S ribosomal RNA
2814092	2816996	-	2905	62178570	SC23Sr2	-	23S ribosomal RNA
2817186	2817262	-	77	62178570	SCTRNA45	-	^{04 Glu tRNA}
2817349	2818892	-	1544	62178570	SC16Sr2	-	16S ribosomal RNA
2924470	2924546	-	77	62178570	SCTRNA46	-	^{11 Arg tRNA}
2924609	2924685	-	77	62178570	SCTRNA47	-	^{11 Arg tRNA}
2924748	2924824	-	77	62178570	SCTRNA48	-	^{11 Arg tRNA}
2924886	2924962	-	77	62178570	SCTRNA49	-	^{11 Arg tRNA}
2924966	2925058	-	93	62178570	SCTRNA50	-	^{08 Ser tRNA}
3100757	3100833	+	77	62178570	SCTRNA51	-	^{16 Met tRNA}
3100863	3100939	+	77	62178570	SCTRNA52	-	^{16 Met tRNA}
3155594	3155667	-	74	62178570	SCTRNA53	-	^{01 Gly tRNA}
3235633	3235708	+	76	62178570	SCTRNA54	-	^{17 Phe tRNA}
3341071	3341146	+	76	62178570	SCTRNA55	-	^{16 Met tRNA}
3414530	3414606	-	77	62178570	SCTRNA56	-	^{16 Met tRNA}
3416491	3416577	-	87	62178570	SCTRNA57	-	^{15 Leu tRNA}
3521191	3521310	-	120	62178570	SC5Sr3	-	5S ribosomal RNA
3521348	3521423	-	76	62178570	SCTRNA58	-	^{12 Thr tRNA}
3521436	3521555	-	120	62178570	SC5Sr32	-	5S ribosomal RNA
3521647	3524553	-	2907	62178570	SC23Sr3	-	23S ribosomal RNA
3524745	3524820	-	76	62178570	SCTRNA59	-	^{04 Glu tRNA}
3524907	3526444	-	1538	62178570	SC16Sr3	-	16S ribosomal RNA
3771190	3771266	-	77	62178570	SCTRNA60	-	^{03 Pro tRNA}
3890879	3890969	+	91	62178570	SCTRNA61	-	Sec tRNA
4035209	4036742	+	1534	62178570	SC16Sr4	-	16S ribosomal RNA
4036813	4036889	+	77	62178570	SCTRNA62	-	^{14 Ile tRNA}
4036999	4037074	+	76	62178570	SCTRNA63	-	^{02 Ala tRNA}
4037255	4040166	+	2912	62178570	SC23Sr4	-	23S ribosomal RNA
4040258	4040377	+	120	62178570	SC5Sr4	-	5S ribosomal RNA
4040430	4040506	+	77	62178570	SCTRNA64	-	^{06 Asp tRNA}
4040515	4040590	+	76	62178570	SCTRNA65	-	^{20 Trp tRNA}
4076704	4076780	+	77	62178570	SCTRNA66	-	^{11 Arg tRNA}
4076835	4076910	+	76	62178570	SCTRNA67	-	^{09 His tRNA}
4076931	4077017	+	87	62178570	SCTRNA68	-	^{15 Leu tRNA}
4077060	4077136	+	77	62178570	SCTRNA69	-	^{03 Pro tRNA}
4130296	4131831	+	1536	62178570	SC16Sr5	-	16S ribosomal RNA
4131902	4131978	+	77	62178570	SCTRNA70	-	^{14 Ile tRNA}
4132088	4132163	+	76	62178570	SCTRNA71	-	^{02 Ala tRNA}
4132343	4135250	+	2908	62178570	SC23Sr5	-	23S ribosomal RNA
4135342	4135461	+	120	62178570	SC5Sr5	-	5S ribosomal RNA
4285504	4287037	+	1534	62178570	SC16Sr6	-	16S ribosomal RNA
4287124	4287199	+	76	62178570	SCTRNA72	-	^{04 Glu tRNA}
4287391	4290298	+	2908	62178570	SC23Sr6	-	23S ribosomal RNA
4290390	4290509	+	120	62178570	SC5Sr6	-	5S ribosomal RNA
4294063	4294138	+	76	62178570	SCTRNA73	-	^{12 Thr tRNA}
4294147	4294231	+	85	62178570	SCTRNA74	-	^{18 Tyr tRNA}
4294348	4294422	+	75	62178570	SCTRNA75	-	^{01 Gly tRNA}
4294429	4294504	+	76	62178570	SCTRNA76	-	^{12 Thr tRNA}
4328261	4329794	+	1534	62178570	SC16Sr7	-	16S ribosomal RNA
4329881	4329956	+	76	62178570	SCTRNA77	-	^{04 Glu tRNA}
4330148	4333054	+	2907	62178570	SC23Sr7	-	23S ribosomal RNA
4333146	4333265	+	120	62178570	SC5Sr7	-	5S ribosomal RNA
4501280	4501355	-	76	62178570	SCTRNA78	-	^{17 Phe tRNA}
4531119	4531194	+	76	62178570	SCTRNA79	-	^{01 Gly tRNA}
4531351	4531426	+	76	62178570	SCTRNA80	-	^{01 Gly tRNA}
4531583	4531658	+	76	62178570	SCTRNA81	-	^{01 Gly tRNA}
4644987	4645071	+	85	62178570	SCTRNA82	-	^{15 Leu tRNA}
4712938	4713024	-	87	62178570	SCTRNA83	-	^{15 Leu tRNA}
4713056	4713142	-	87	62178570	SCTRNA84	-	^{15 Leu tRNA}
4713170	4713256	-	87	62178570	SCTRNA85	-	^{15 Leu tRNA}