Материалы:NC 007712

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007712            4171146 bp    DNA     circular BCT 30-MAR-2006
   DEFINITION  Sodalis glossinidius str. 'morsitans', complete genome.
   ACCESSION   NC_007712
   VERSION     NC_007712.1  GI:85057978
   KEYWORDS    .
   SOURCE      Sodalis glossinidius str. 'morsitans'
     ORGANISM  Sodalis glossinidius str. 'morsitans'
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Sodalis.
   REFERENCE   1
     AUTHORS   Toh,H., Weiss,B.L., Perkin,S.A., Yamashita,A., Oshima,K.,
               Hattori,M. and Aksoy,S.
     TITLE     Massive genome erosion and functional adaptations provide insights
               into the symbiotic lifestyle of Sodalis glossinidius in the tsetse
               host
     JOURNAL   Genome Res. 16 (2), 149-156 (2006)
      PUBMED   16365377
   REFERENCE   2  (bases 1 to 4171146)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (18-JAN-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4171146)
     AUTHORS   Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
     TITLE     Direct Submission
     JOURNAL   Submitted (14-DEC-2004) Masahira Hattori, Kitasato Institute for
               Life Sciences; 1-15-1 Kitasato, Sagamihara, Kanagawa 228-0829,
               Japan (E-mail:hattori@genome.ls.kitasato-u.ac.jp,
               URL:http://genome.ls.kitasato-u.ac.jp, Tel:81-42-778-8194)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP008232.
               COMPLETENESS: full length.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
40585	40661	+	77	85057978	SGtRNA01	-	^{03 Pro tRNA}
200275	201785	+	1511	85057978	SG16SrRNA01	-	16S ribosomal RNA
201859	201935	+	77	85057978	SGtRNA02	-	^{14 Ile tRNA}
202134	202209	+	76	85057978	SGtRNA03	-	^{02 Ala tRNA}
202457	205112	+	2656	85057978	SG23SrRNA01	-	23S ribosomal RNA
205656	205775	+	120	85057978	SG5SrRNA01	-	5S ribosomal RNA
211759	211834	+	76	85057978	SGtRNA04	-	^{12 Thr tRNA}
211845	211929	+	85	85057978	SGtRNA05	-	^{18 Tyr tRNA}
212111	212185	+	75	85057978	SGtRNA06	-	^{01 Gly tRNA}
212190	212265	+	76	85057978	SGtRNA07	-	^{12 Thr tRNA}
237229	238739	+	1511	85057978	SG16SrRNA02	-	16S ribosomal RNA
238813	238889	+	77	85057978	SGtRNA08	-	^{14 Ile tRNA}
239088	239163	+	76	85057978	SGtRNA09	-	^{02 Ala tRNA}
239411	242066	+	2656	85057978	SG23SrRNA02	-	23S ribosomal RNA
242610	242729	+	120	85057978	SG5SrRNA02	-	5S ribosomal RNA
242774	242849	+	76	85057978	SGtRNA10	-	^{12 Thr tRNA}
242884	243003	+	120	85057978	SG5SrRNA03	-	5S ribosomal RNA
464687	464762	-	76	85057978	SGtRNA69	-	^{16 Met tRNA}
546018	546093	-	76	85057978	SGtRNA68	-	^{17 Phe tRNA}
564489	564563	+	75	85057978	SGtRNA11	-	^{01 Gly tRNA}
605596	605670	+	75	85057978	SGtRNA12	-	^{01 Gly tRNA}
615389	615463	+	75	85057978	SGtRNA13	-	^{01 Gly tRNA}
671443	671529	+	87	85057978	SGtRNA14	-	^{15 Leu tRNA}
671589	671665	+	77	85057978	SGtRNA15	-	^{16 Met tRNA}
690838	690924	-	87	85057978	SGtRNA67	-	^{15 Leu tRNA}
938277	938369	+	93	85057978	SGtRNA16	-	^{08 Ser tRNA}
938378	938454	+	77	85057978	SGtRNA17	-	^{11 Arg tRNA}
987390	988900	+	1511	85057978	SG16SrRNA03	-	16S ribosomal RNA
989122	989197	+	76	85057978	SGtRNA18	-	^{04 Glu tRNA}
989393	992048	+	2656	85057978	SG23SrRNA03	-	23S ribosomal RNA
992592	992711	+	120	85057978	SG5SrRNA04	-	5S ribosomal RNA
992842	992918	+	77	85057978	SGtRNA19	-	^{06 Asp tRNA}
1000087	1000163	+	77	85057978	SGtRNA20	-	^{06 Asp tRNA}
1014141	1014216	+	76	85057978	SGtRNA21	-	^{12 Thr tRNA}
1188845	1188921	+	77	85057978	SGtRNA22	-	^{11 Arg tRNA}
1371550	1371624	-	75	85057978	SGtRNA66	-	^{05 Gln tRNA}
1371631	1371707	-	77	85057978	SGtRNA65	-	^{16 Met tRNA}
1371759	1371833	-	75	85057978	SGtRNA64	-	^{05 Gln tRNA}
1371880	1371954	-	75	85057978	SGtRNA63	-	^{05 Gln tRNA}
1371974	1372059	-	86	85057978	SGtRNA62	-	^{15 Leu tRNA}
1372065	1372141	-	77	85057978	SGtRNA61	-	^{16 Met tRNA}
1447809	1447884	+	76	85057978	SGtRNA23	-	^{10 Lys tRNA}
1713752	1713839	-	88	85057978	SGtRNA60	-	^{08 Ser tRNA}
1896182	1896257	-	76	85057978	SGtRNA59	-	^{07 Asn tRNA}
1897323	1897412	+	90	85057978	SGtRNA24	-	^{08 Ser tRNA}
1900775	1900850	+	76	85057978	SGtRNA25	-	^{10 Lys tRNA}
1963075	1963150	+	76	85057978	SGtRNA26	-	^{10 Lys tRNA}
1973145	1973219	+	75	85057978	SGtRNA27	-	^{01 Gly tRNA}
1973719	1973792	+	74	85057978	SGtRNA28	-	^{19 Cys tRNA}
1973809	1973894	+	86	85057978	SGtRNA29	-	^{15 Leu tRNA}
2099841	2099930	-	90	85057978	SGtRNA58	-	^{08 Ser tRNA}
2265632	2265715	-	84	85057978	SGtRNA57	-	^{18 Tyr tRNA}
2407784	2407860	-	77	85057978	SGtRNA56	-	^{13 Val tRNA}
2407869	2407945	-	77	85057978	SGtRNA55	-	^{13 Val tRNA}
2623087	2623162	+	76	85057978	SGtRNA30	-	^{07 Asn tRNA}
2663264	2663334	-	71	85057978	SGtRNA54	-	^{10 Lys tRNA}
2692848	2692924	+	77	85057978	SGtRNA31	-	^{03 Pro tRNA}
2798749	2798823	+	75	85057978	SGtRNA32	-	^{11 Arg tRNA}
2856930	2857005	-	76	85057978	SGtRNA53	-	^{02 Ala tRNA}
2858786	2858861	+	76	85057978	SGtRNA33	-	^{13 Val tRNA}
2858915	2858990	+	76	85057978	SGtRNA34	-	^{13 Val tRNA}
2859009	2859084	+	76	85057978	SGtRNA35	-	^{10 Lys tRNA}
3305796	3305915	-	120	85057978	SG5SrRNA05	-	5S ribosomal RNA
3306459	3309114	-	2656	85057978	SG23SrRNA04	-	23S ribosomal RNA
3309310	3309385	-	76	85057978	SGtRNA52	-	^{04 Glu tRNA}
3309607	3311118	-	1512	85057978	SG16SrRNA04	-	16S ribosomal RNA
3370940	3371016	+	77	85057978	SGtRNA36	-	^{16 Met tRNA}
3371081	3371157	+	77	85057978	SGtRNA37	-	^{16 Met tRNA}
3440656	3440729	-	74	85057978	SGtRNA51	-	^{01 Gly tRNA}
3507160	3507235	+	76	85057978	SGtRNA38	-	^{17 Phe tRNA}
3643261	3643345	-	85	85057978	SGtRNA50	-	^{15 Leu tRNA}
3746548	3746667	-	120	85057978	SG5SrRNA06	-	5S ribosomal RNA
3747211	3749866	-	2656	85057978	SG23SrRNA05	-	23S ribosomal RNA
3750114	3750189	-	76	85057978	SGtRNA49	-	^{02 Ala tRNA}
3750388	3750464	-	77	85057978	SGtRNA48	-	^{14 Ile tRNA}
3750538	3752048	-	1511	85057978	SG16SrRNA05	-	16S ribosomal RNA
3896533	3896652	-	120	85057978	SG5SrRNA07	-	5S ribosomal RNA
3897196	3899851	-	2656	85057978	SG23SrRNA06	-	23S ribosomal RNA
3900099	3900174	-	76	85057978	SGtRNA47	-	^{02 Ala tRNA}
3900373	3900449	-	77	85057978	SGtRNA46	-	^{14 Ile tRNA}
3900523	3902033	-	1511	85057978	SG16SrRNA06	-	16S ribosomal RNA
4077564	4077640	-	77	85057978	SGtRNA45	-	^{03 Pro tRNA}
4077721	4077807	-	87	85057978	SGtRNA44	-	^{15 Leu tRNA}
4077822	4077897	-	76	85057978	SGtRNA43	-	^{09 His tRNA}
4077959	4078035	-	77	85057978	SGtRNA42	-	^{11 Arg tRNA}
4114915	4114990	-	76	85057978	SGtRNA41	-	^{20 Trp tRNA}
4114999	4115075	-	77	85057978	SGtRNA40	-	^{06 Asp tRNA}
4115210	4115329	-	120	85057978	SG5SrRNA08	-	5S ribosomal RNA
4115873	4118528	-	2656	85057978	SG23SrRNA07	-	23S ribosomal RNA
4118724	4118799	-	76	85057978	SGtRNA39	-	^{04 Glu tRNA}
4119021	4120531	-	1511	85057978	SG16SrRNA07	-	16S ribosomal RNA