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Материалы:NC 008027

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   LOCUS       NC_008027            5888780 bp    DNA     circular BCT 14-SEP-2007
   DEFINITION  Pseudomonas entomophila L48, complete genome.
   ACCESSION   NC_008027
   VERSION     NC_008027.1  GI:104779316
   KEYWORDS    .
   SOURCE      Pseudomonas entomophila L48
     ORGANISM  Pseudomonas entomophila L48
               Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
               Pseudomonadaceae; Pseudomonas.
   REFERENCE   1  (bases 1 to 5888780)
     AUTHORS   Vodovar,N., Vallenet,D., Cruveiller,S., Rouy,Z., Barbe,V.,
               Acosta,C., Cattolico,L., Jubin,C., Lajus,A., Segurens,B.,
               Vacherie,B., Wincker,P., Weissenbach,J., Lemaitre,B., Medigue,C.
               and Boccard,F.
     TITLE     Complete genome sequence of the entomopathogenic and metabolically
               versatile soil bacterium Pseudomonas entomophila
     JOURNAL   Nat. Biotechnol. 24 (6), 673-679 (2006)
      PUBMED   16699499
   REFERENCE   2  (bases 1 to 5888780)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (16-MAY-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5888780)
     AUTHORS   Genoscope.
     TITLE     Direct Submission
     JOURNAL   Submitted (27-JAN-2006) Genoscope - Centre National de Sequencage :
               BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
               - Web : www.genoscope.cns.fr)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CT573326.
               COMPLETENESS: full length.


Расположение РНК

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Начало Конец Направление Длина PID Ген COG Комментарий
115507 117024 + 1518 104779316 PSEEN_16s_3 - ribosomal RNA 16s
117106 117182 + 77 104779316 PSEENtRNA1 - 14 Ile tRNA
117189 117264 + 76 104779316 PSEENtRNA2 - 02 Ala tRNA
117510 120411 + 2902 104779316 PSEEN_23s_3 - ribosomal RNA 23s
120536 120655 + 120 104779316 PSEEN_5s_3 - ribosomal RNA 5s
120761 120880 + 120 104779316 PSEEN_5s_4 - ribosomal RNA 5s
180363 180439 - 77 104779316 PSEENtRNA78 - 11 Arg tRNA
431613 431689 - 77 104779316 PSEENtRNA77 - 16 Met tRNA
490048 491565 + 1518 104779316 PSEEN_16s_4 - ribosomal RNA 16s
491647 491723 + 77 104779316 PSEENtRNA3 - 14 Ile tRNA
491730 491805 + 76 104779316 PSEENtRNA4 - 02 Ala tRNA
492051 494952 + 2902 104779316 PSEEN_23s_4 - ribosomal RNA 23s
495075 495194 + 120 104779316 PSEEN_5s_5 - ribosomal RNA 5s
497718 497801 + 84 104779316 PSEENtRNA5 - 18 Tyr tRNA
497826 497899 + 74 104779316 PSEENtRNA6 - 01 Gly tRNA
497928 498003 + 76 104779316 PSEENtRNA7 - 12 Thr tRNA
499331 499406 + 76 104779316 PSEENtRNA8 - 20 Trp tRNA
585849 585944 + 96 104779316 PSEENtRNA9 - Sec tRNA
696516 698033 + 1518 104779316 PSEEN_16s_5 - ribosomal RNA 16s
698115 698191 + 77 104779316 PSEENtRNA10 - 14 Ile tRNA
698198 698273 + 76 104779316 PSEENtRNA11 - 02 Ala tRNA
698519 701421 + 2903 104779316 PSEEN_23s_5 - ribosomal RNA 23s
701544 701663 + 120 104779316 PSEEN_5s_6 - ribosomal RNA 5s
791375 791766 - 392 104779316 PSEENmisc_RNA791375R - tmRNA involved in trans-translation
822290 822375 + 86 104779316 PSEENtRNA12 - 15 Leu tRNA
822475 822551 + 77 104779316 PSEENtRNA13 - 16 Met tRNA
872404 872480 - 77 104779316 PSEENtRNA76 - 16 Met tRNA
892253 892327 - 75 104779316 PSEENtRNA75 - 05 Gln tRNA
1052156 1052240 - 85 104779316 PSEENtRNA74 - 15 Leu tRNA
1375561 1377078 + 1518 104779316 PSEEN_16s_6 - ribosomal RNA 16s
1377160 1377236 + 77 104779316 PSEENtRNA14 - 14 Ile tRNA
1377243 1377318 + 76 104779316 PSEENtRNA15 - 02 Ala tRNA
1377564 1380465 + 2902 104779316 PSEEN_23s_6 - ribosomal RNA 23s
1380588 1380707 + 120 104779316 PSEEN_5s_7 - ribosomal RNA 5s
1472196 1472271 + 76 104779316 PSEENtRNA16 - 13 Val tRNA
1472285 1472361 + 77 104779316 PSEENtRNA17 - 06 Asp tRNA
1616236 1616325 + 90 104779316 PSEENtRNA18 - 08 Ser tRNA
1660302 1660377 + 76 104779316 PSEENtRNA19 - 04 Glu tRNA
1660380 1660455 + 76 104779316 PSEENtRNA20 - 01 Gly tRNA
1660548 1660623 + 76 104779316 PSEENtRNA21 - 04 Glu tRNA
1660627 1660702 + 76 104779316 PSEENtRNA22 - 01 Gly tRNA
1660785 1660860 + 76 104779316 PSEENtRNA23 - 01 Gly tRNA
1700426 1700501 - 76 104779316 PSEENtRNA73 - 07 Asn tRNA
1708730 1708805 + 76 104779316 PSEENtRNA24 - 02 Ala tRNA
1708878 1708953 + 76 104779316 PSEENtRNA25 - 04 Glu tRNA
1709006 1709081 + 76 104779316 PSEENtRNA26 - 02 Ala tRNA
1709124 1709199 + 76 104779316 PSEENtRNA27 - 04 Glu tRNA
1709266 1709341 + 76 104779316 PSEENtRNA28 - 02 Ala tRNA
1709384 1709459 + 76 104779316 PSEENtRNA29 - 04 Glu tRNA
1767502 1767577 + 76 104779316 PSEENtRNA30 - 13 Val tRNA
1767659 1767735 + 77 104779316 PSEENtRNA31 - 06 Asp tRNA
1767818 1767894 + 77 104779316 PSEENtRNA32 - 06 Asp tRNA
1768034 1768110 + 77 104779316 PSEENtRNA33 - 06 Asp tRNA
1854972 1855084 + 113 104779316 PSEENmisc_RNA1854972D - mature 4.5S RN
1952643 1952719 + 77 104779316 PSEENtRNA34 - 11 Arg tRNA
1952755 1952830 + 76 104779316 PSEENtRNA35 - 09 His tRNA
1952887 1952971 + 85 104779316 PSEENtRNA36 - 15 Leu tRNA
1953008 1953083 + 76 104779316 PSEENtRNA37 - 09 His tRNA
2054946 2055022 + 77 104779316 PSEENtRNA38 - 03 Pro tRNA
2275429 2275505 + 77 104779316 PSEENtRNA39 - 13 Val tRNA
2275839 2275915 + 77 104779316 PSEENtRNA40 - 13 Val tRNA
2337548 2337635 + 88 104779316 PSEENtRNA41 - 08 Ser tRNA
2367754 2367827 + 74 104779316 PSEENtRNA42 - 19 Cys tRNA
2370221 2370305 - 85 104779316 PSEENtRNA72 - 15 Leu tRNA
2739329 2740846 + 1518 104779316 PSEEN_16s_7 - ribosomal RNA 16s
2740928 2741004 + 77 104779316 PSEENtRNA43 - 14 Ile tRNA
2741011 2741086 + 76 104779316 PSEENtRNA44 - 02 Ala tRNA
2741332 2744233 + 2902 104779316 PSEEN_23s_7 - ribosomal RNA 23s
2744356 2744475 + 120 104779316 PSEEN_5s_8 - ribosomal RNA 5s
3656603 3656753 + 151 104779316 PSEENmisc_RNA3656603D - regulatory RNA PrrF1
3670673 3670747 - 75 104779316 PSEENtRNA71 - 05 Gln tRNA
3722568 3722643 - 76 104779316 PSEENtRNA70 - 01 Gly tRNA
3795513 3795632 - 120 104779316 PSEEN_5s_2 - ribosomal RNA 5s
3795755 3798656 - 2902 104779316 PSEEN_23s_2 - ribosomal RNA 23s
3798902 3798977 - 76 104779316 PSEENtRNA69 - 02 Ala tRNA
3798984 3799060 - 77 104779316 PSEENtRNA68 - 14 Ile tRNA
3799142 3800659 - 1518 104779316 PSEEN_16s_2 - ribosomal RNA 16s
4024934 4025010 + 77 104779316 PSEENtRNA45 - 03 Pro tRNA
4152602 4152678 - 77 104779316 PSEENtRNA67 - 11 Arg tRNA
4156158 4156234 - 77 104779316 PSEENtRNA66 - 11 Arg tRNA
4156304 4156380 - 77 104779316 PSEENtRNA65 - 11 Arg tRNA
4156451 4156527 - 77 104779316 PSEENtRNA64 - 11 Arg tRNA
4156598 4156674 - 77 104779316 PSEENtRNA63 - 11 Arg tRNA
4156741 4156831 - 91 104779316 PSEENtRNA62 - 08 Ser tRNA
4357182 4357271 - 90 104779316 PSEENtRNA61 - 08 Ser tRNA
4381324 4381399 - 76 104779316 PSEENtRNA60 - 10 Lys tRNA
4402622 4402698 + 77 104779316 PSEENtRNA46 - 16 Met tRNA
4402830 4402906 + 77 104779316 PSEENtRNA47 - 16 Met tRNA
4403039 4403115 + 77 104779316 PSEENtRNA48 - 16 Met tRNA
4468721 4468852 - 132 104779316 PSEENmisc_RNA4468721R - small regulatory RNA rsmZ
4608564 4608637 + 74 104779316 PSEENtRNA49 - 01 Gly tRNA
4810184 4810543 - 360 104779316 PSEENmisc_RNA4810200R - RNA component of RNAseP (ribozyme)
4967960 4968035 - 76 104779316 PSEENtRNA59 - 12 Thr tRNA
4976158 4976233 - 76 104779316 PSEENtRNA58 - 10 Lys tRNA
4976240 4976316 - 77 104779316 PSEENtRNA57 - 03 Pro tRNA
4976321 4976396 - 76 104779316 PSEENtRNA56 - 07 Asn tRNA
4998500 4998619 - 120 104779316 PSEEN_5s_1 - ribosomal RNA 5s
4998744 5001645 - 2902 104779316 PSEEN_23s_1 - ribosomal RNA 23s
5001891 5001966 - 76 104779316 PSEENtRNA55 - 02 Ala tRNA
5001991 5002067 - 77 104779316 PSEENtRNA54 - 14 Ile tRNA
5002158 5003675 - 1518 104779316 PSEEN_16s_1 - ribosomal RNA 16s
5016966 5017114 + 149 104779316 PSEENmisc_RNA5016966D - regulatory RNA PrrF2
5236127 5236213 + 87 104779316 PSEENtRNA50 - 15 Leu tRNA
5236301 5236387 + 87 104779316 PSEENtRNA51 - 15 Leu tRNA
5427050 5427174 - 125 104779316 PSEENmisc_RNA5427050R - rsmY regulatory RNA
5528261 5528336 + 76 104779316 PSEENtRNA52 - 17 Phe tRNA
5540601 5540676 + 76 104779316 PSEENtRNA53 - 12 Thr tRNA