Материалы:NC 008258

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   LOCUS       NC_008258            4574284 bp    DNA     circular BCT 14-SEP-2007
   DEFINITION  Shigella flexneri 5 str. 8401, complete genome.
   ACCESSION   NC_008258
   VERSION     NC_008258.1  GI:110804074
   KEYWORDS    .
   SOURCE      Shigella flexneri 5 str. 8401
     ORGANISM  Shigella flexneri 5 str. 8401
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Shigella.
   REFERENCE   1  (bases 1 to 4574284)
     AUTHORS   Nie,H., Yang,F., Zhang,X., Yang,J., Chen,L., Wang,J., Xiong,Z.,
               Peng,J., Sun,L., Dong,J., Xue,Y., Xu,X., Chen,S., Yao,Z., Shen,Y.
               and Jin,Q.
     TITLE     Complete genome sequence of Shigella flexneri 5b and comparison
               with Shigella flexneri 2a
     JOURNAL   (er) BMC Genomics 7, 173 (2006)
      PUBMED   16822325
   REFERENCE   2  (bases 1 to 4574284)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (28-JUL-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4574284)
     AUTHORS   Nie,H. and Jin,Q.
     TITLE     Direct Submission
     JOURNAL   Submitted (22-FEB-2006) State Key Laboratory for Moleclular
               Virology and Genetic Engineering, Microbial Genome Center of
               Chinese Ministry of Public Health, 100 YingXin Street, XuanWu,
               Beijing, Beijing 100052, China
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000266.
               Strain 8401 is available from the National Institute for
               Communicable Disease Control and Prevention, Chinese Center for
               Disease Control and Prevention.
               COMPLETENESS: full length.


Расположение РНК[править]

Начало Конец Направление Длина PID Ген COG Комментарий
214329 215870 + 1542 110804074 SFV_0185 - 16S ribosomal RNA
215956 216031 + 76 110804074 SFV_0186 - 04 Glu tRNA
216225 219128 + 2904 110804074 SFV_0187 - 23S ribosomal RNA
219223 219341 + 119 110804074 SFV_0188 - 5S ribosomal RNA
219394 219470 + 77 110804074 SFV_0189 - 06 Asp tRNA
229056 229132 + 77 110804074 SFV_0200 - 06 Asp tRNA
300690 300765 - 76 110804074 SFV_0284 - 12 Thr tRNA
521805 521881 + 77 110804074 SFV_0498 - 11 Arg tRNA
619435 619510 - 76 110804074 SFV_0591 - 10 Lys tRNA
619514 619589 - 76 110804074 SFV_0592 - 13 Val tRNA
619725 619800 - 76 110804074 SFV_0593 - 10 Lys tRNA
699071 699147 + 77 110804074 SFV_0658 - 16 Met tRNA
699157 699241 + 85 110804074 SFV_0659 - 15 Leu tRNA
699265 699339 + 75 110804074 SFV_0660 - 05 Gln tRNA
699374 699448 + 75 110804074 SFV_0661 - 05 Gln tRNA
699464 699540 + 77 110804074 SFV_0662 - 16 Met tRNA
699589 699663 + 75 110804074 SFV_0663 - 05 Gln tRNA
699701 699775 + 75 110804074 SFV_0664 - 05 Gln tRNA
761608 761682 - 75 110804074 SFV_0729 - 01 Gly tRNA
761686 761760 - 75 110804074 SFV_0730 - 12 Thr tRNA
761763 761839 - 77 110804074 SFV_0731 - 11 Arg tRNA
761841 761917 - 77 110804074 SFV_0732 - 16 Met tRNA
911349 911436 - 88 110804074 SFV_0874 - 08 Ser tRNA
1028186 1028273 - 88 110804074 SFV_0980 - 08 Ser tRNA
1091825 1091912 - 88 110804074 SFV_1043 - 08 Ser tRNA
1297271 1297355 - 85 110804074 SFV_1244 - 18 Tyr tRNA
1416161 1416237 + 77 110804074 SFV_1364 - 16 Met tRNA
1416239 1416315 + 77 110804074 SFV_1365 - 11 Arg tRNA
1416318 1416393 + 76 110804074 SFV_1366 - 12 Thr tRNA
1416397 1416471 + 75 110804074 SFV_1367 - 01 Gly tRNA
1580026 1580102 - 77 110804074 SFV_1538 - 11 Arg tRNA
1580204 1580279 - 76 110804074 SFV_1539 - 16 Met tRNA
1725568 1725644 + 77 110804074 SFV_1687 - 13 Val tRNA
1725649 1725725 + 77 110804074 SFV_1688 - 13 Val tRNA
1937422 1937496 - 75 110804074 SFV_1888 - 01 Gly tRNA
1937500 1937575 - 76 110804074 SFV_1889 - 12 Thr tRNA
1937578 1937654 - 77 110804074 SFV_1890 - 11 Arg tRNA
1937656 1937731 - 76 110804074 SFV_1891 - 16 Met tRNA
1996770 1996856 - 87 110804074 SFV_1953 - 15 Leu tRNA
1996869 1996942 - 74 110804074 SFV_1954 - 19 Cys tRNA
1996997 1997072 - 76 110804074 SFV_1955 - 01 Gly tRNA
2061198 2061272 - 75 110804074 SFV_2030 - 01 Gly tRNA
2061276 2061351 - 76 110804074 SFV_2031 - 12 Thr tRNA
2061354 2061430 - 77 110804074 SFV_2032 - 10 Lys tRNA
2061432 2061507 - 76 110804074 SFV_2033 - 16 Met tRNA
2068694 2068783 - 90 110804074 SFV_2044 - 08 Ser tRNA
2069775 2069850 + 76 110804074 SFV_2046 - 07 Asn tRNA
2077654 2077729 - 76 110804074 SFV_2055 - 07 Asn tRNA
2079462 2079537 + 76 110804074 SFV_2058 - 07 Asn tRNA
2081872 2081947 + 76 110804074 SFV_2061 - 07 Asn tRNA
2303108 2303184 + 77 110804074 SFV_2267 - 03 Pro tRNA
2468390 2468464 + 75 110804074 SFV_2416 - 11 Arg tRNA
2513270 2513345 - 76 110804074 SFV_2452 - 02 Ala tRNA
2516051 2516126 + 76 110804074 SFV_2456 - 13 Val tRNA
2516170 2516245 + 76 110804074 SFV_2457 - 13 Val tRNA
2516250 2516325 + 76 110804074 SFV_2458 - 10 Lys tRNA
2719591 2719709 - 119 110804074 SFV_2651 - 5S ribosomal RNA
2719804 2722707 - 2904 110804074 SFV_2652 - 23S ribosomal RNA
2722901 2722976 - 76 110804074 SFV_2653 - 04 Glu tRNA
2723062 2724603 - 1542 110804074 SFV_2654 - 16S ribosomal RNA
2773368 2773444 + 77 110804074 SFV_2700 - 16 Met tRNA
2773446 2773522 + 77 110804074 SFV_2701 - 11 Arg tRNA
2773525 2773600 + 76 110804074 SFV_2702 - 12 Thr tRNA
2773604 2773678 + 75 110804074 SFV_2703 - 01 Gly tRNA
2878553 2878645 + 93 110804074 SFV_2810 - 08 Ser tRNA
2878649 2878725 + 77 110804074 SFV_2811 - 11 Arg tRNA
2878790 2878866 + 77 110804074 SFV_2812 - 11 Arg tRNA
2878931 2879007 + 77 110804074 SFV_2813 - 11 Arg tRNA
2910825 2910900 + 76 110804074 SFV_2846 - 16 Met tRNA
2954823 2954899 + 77 110804074 SFV_2893 - 16 Met tRNA
2954933 2955009 + 77 110804074 SFV_2894 - 16 Met tRNA
2996991 2997064 - 74 110804074 SFV_2927 - 01 Gly tRNA
3090255 3090330 + 76 110804074 SFV_3026 - 17 Phe tRNA
3177925 3178000 + 76 110804074 SFV_3110 - 16 Met tRNA
3274053 3274129 - 77 110804074 SFV_3201 - 16 Met tRNA
3277913 3277999 - 87 110804074 SFV_3204 - 15 Leu tRNA
3368182 3368298 - 117 110804074 SFV_3294 - 5S ribosomal RNA
3368339 3368414 - 76 110804074 SFV_3295 - 12 Thr tRNA
3368427 3368545 - 119 110804074 SFV_3296 - 5S ribosomal RNA
3368640 3371543 - 2904 110804074 SFV_3297 - 23S ribosomal RNA
3371737 3371812 - 76 110804074 SFV_3298 - 04 Glu tRNA
3371898 3373439 - 1542 110804074 SFV_3299 - 16S ribosomal RNA
3611713 3611789 + 77 110804074 SFV_3542 - 03 Pro tRNA
3730174 3730292 - 119 110804074 SFV_3646 - 5S ribosomal RNA
3730387 3733290 - 2904 110804074 SFV_3647 - 23S ribosomal RNA
3733484 3733559 - 76 110804074 SFV_3648 - 04 Glu tRNA
3733645 3735186 - 1542 110804074 SFV_3649 - 16S ribosomal RNA
3791507 3791583 - 77 110804074 SFV_3704 - 03 Pro tRNA
3791626 3791712 - 87 110804074 SFV_3705 - 15 Leu tRNA
3791733 3791808 - 76 110804074 SFV_3706 - 09 His tRNA
3791867 3791943 - 77 110804074 SFV_3707 - 11 Arg tRNA
3826408 3826483 - 76 110804074 SFV_3738 - 20 Trp tRNA
3826492 3826568 - 77 110804074 SFV_3739 - 06 Asp tRNA
3826621 3826739 - 119 110804074 SFV_3740 - 5S ribosomal RNA
3826834 3829737 - 2904 110804074 SFV_3741 - 23S ribosomal RNA
3829931 3830006 - 76 110804074 SFV_3742 - 04 Glu tRNA
3830092 3831633 - 1542 110804074 SFV_3743 - 16S ribosomal RNA
3971892 3971982 - 91 110804074 SFV_3871 - Sec tRNA
4157855 4159396 + 1542 110804074 SFV_4041 - 16S ribosomal RNA
4159482 4159557 + 76 110804074 SFV_4042 - 04 Glu tRNA
4159751 4162654 + 2904 110804074 SFV_4043 - 23S ribosomal RNA
4162749 4162867 + 119 110804074 SFV_4044 - 5S ribosomal RNA
4166325 4166400 + 76 110804074 SFV_4048 - 12 Thr tRNA
4166409 4166493 + 85 110804074 SFV_4049 - 18 Tyr tRNA
4166610 4166684 + 75 110804074 SFV_4050 - 01 Gly tRNA
4166691 4166766 + 76 110804074 SFV_4051 - 12 Thr tRNA
4198290 4199835 + 1546 110804074 SFV_4079 - 16S ribosomal RNA
4199921 4199996 + 76 110804074 SFV_4080 - 04 Glu tRNA
4200190 4203093 + 2904 110804074 SFV_4081 - 23S ribosomal RNA
4203188 4203306 + 119 110804074 SFV_4082 - 5S ribosomal RNA
4364730 4364814 - 85 110804074 SFV_4228 - 15 Leu tRNA
4434756 4434831 - 76 110804074 SFV_4290 - 17 Phe tRNA
4464764 4464839 + 76 110804074 SFV_4320 - 01 Gly tRNA
4464997 4465072 + 76 110804074 SFV_4321 - 01 Gly tRNA
4465108 4465183 + 76 110804074 SFV_4322 - 01 Gly tRNA
4465219 4465294 + 76 110804074 SFV_4323 - 01 Gly tRNA
4540013 4540099 - 87 110804074 SFV_4402 - 15 Leu tRNA
4540134 4540220 - 87 110804074 SFV_4403 - 15 Leu tRNA
4540249 4540335 - 87 110804074 SFV_4404 - 15 Leu tRNA