Материалы:NC 008380
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LOCUS NC_008380 5057142 bp DNA circular BCT 27-JUN-2007 DEFINITION Rhizobium leguminosarum bv. viciae 3841, complete genome. ACCESSION NC_008380 VERSION NC_008380.1 GI:116249766 KEYWORDS complete genome. SOURCE Rhizobium leguminosarum bv. viciae 3841 ORGANISM Rhizobium leguminosarum bv. viciae 3841 Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium. REFERENCE 1 (bases 1 to 5057142) AUTHORS Young,J.P., Crossman,L.C., Johnston,A.W., Thomson,N.R., Ghazoui,Z.F., Hull,K.H., Wexler,M., Curson,A.R., Todd,J.D., Poole,P.S., Mauchline,T.H., East,A.K., Quail,M.A., Churcher,C., Arrowsmith,C., Cherevach,I., Chillingworth,T., Clarke,K., Cronin,A., Davis,P., Fraser,A., Hance,Z., Hauser,H., Jagels,K., Moule,S., Mungall,K., Norbertczak,H., Rabbinowitsch,E., Sanders,M., Simmonds,M., Whitehead,S. and Parkhill,J. TITLE The genome of Rhizobium leguminosarum has recognizable core and accessory components JOURNAL (er) Genome Biol. 7 (4), R34 (2006) PUBMED 16640791 REFERENCE 2 (bases 1 to 5057142) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 5057142) AUTHORS Crossman,L.C. TITLE Direct Submission JOURNAL Submitted (21-FEB-2006) Crossman L.C., Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Hinxton, Cambridge, Cambridgeshire, CB10 1SA, UNITED KINGDOM COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AM236080. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
63649 | 65093 | + | 1445 | 116249766 | RLr01 | - | 16S ribosomal RNA |
65462 | 65538 | + | 77 | 116249766 | RLt31 | - | 14 Ile tRNA |
65632 | 65707 | + | 76 | 116249766 | RLt10 | - | 02 Ala tRNA |
66549 | 69209 | + | 2661 | 116249766 | RLr04 | - | 23S ribosomal RNA |
69432 | 69551 | + | 120 | 116249766 | RLr07 | - | 5S ribosomal RNA |
69764 | 69840 | + | 77 | 116249766 | RLt41 | - | 16 Met tRNA |
139901 | 139976 | + | 76 | 116249766 | RLt11 | - | 02 Ala tRNA |
231045 | 231134 | - | 90 | 116249766 | RLt52 | - | 08 Ser tRNA |
287614 | 287700 | - | 87 | 116249766 | RLt38 | - | 15 Leu tRNA |
496206 | 496282 | + | 77 | 116249766 | RLt14 | - | 11 Arg tRNA |
580019 | 580094 | - | 76 | 116249766 | RLt56 | - | 12 Thr tRNA |
600977 | 601050 | + | 74 | 116249766 | RLt27 | - | 01 Gly tRNA |
661908 | 661982 | - | 75 | 116249766 | RLt57 | - | 12 Thr tRNA |
668127 | 668202 | + | 76 | 116249766 | RLt46 | - | 17 Phe tRNA |
832143 | 832219 | + | 77 | 116249766 | RLt30 | - | 09 His tRNA |
909016 | 909089 | - | 74 | 116249766 | RLt23 | - | 05 Gln tRNA |
1176308 | 1176381 | + | 74 | 116249766 | RLt22 | - | 05 Gln tRNA |
1194114 | 1194190 | + | 77 | 116249766 | RLt47 | - | 03 Pro tRNA |
1567071 | 1567161 | + | 91 | 116249766 | RLt50 | - | 08 Ser tRNA |
1728057 | 1728133 | + | 77 | 116249766 | RLt48 | - | 03 Pro tRNA |
1782221 | 1782296 | - | 76 | 116249766 | RLt61 | - | 13 Val tRNA |
1782701 | 1782777 | + | 77 | 116249766 | RLt19 | - | 06 Asp tRNA |
1782862 | 1782938 | + | 77 | 116249766 | RLt20 | - | 06 Asp tRNA |
1853114 | 1853189 | + | 76 | 116249766 | RLt55 | - | 12 Thr tRNA |
1855650 | 1855734 | + | 85 | 116249766 | RLt59 | - | 18 Tyr tRNA |
1855760 | 1855833 | + | 74 | 116249766 | RLt28 | - | 01 Gly tRNA |
1858899 | 1858974 | + | 76 | 116249766 | RLt58 | - | 20 Trp tRNA |
2058399 | 2058483 | + | 85 | 116249766 | RLt34 | - | 15 Leu tRNA |
2137402 | 2137476 | - | 75 | 116249766 | RLt18 | - | 07 Asn tRNA |
2140071 | 2140144 | + | 74 | 116249766 | RLt21 | - | 19 Cys tRNA |
2177244 | 2177328 | + | 85 | 116249766 | RLt35 | - | 15 Leu tRNA |
2212458 | 2212532 | - | 75 | 116249766 | RLt24 | - | 04 Glu tRNA |
2212786 | 2212860 | - | 75 | 116249766 | RLt25 | - | 04 Glu tRNA |
2212935 | 2213009 | - | 75 | 116249766 | RLt26 | - | 04 Glu tRNA |
2216207 | 2216283 | - | 77 | 116249766 | RLt49 | - | 03 Pro tRNA |
2217287 | 2217363 | + | 77 | 116249766 | RLt15 | - | 11 Arg tRNA |
2428532 | 2428607 | + | 76 | 116249766 | RLt39 | - | 10 Lys tRNA |
2617487 | 2617576 | + | 90 | 116249766 | RLt51 | - | 08 Ser tRNA |
2692052 | 2692136 | + | 85 | 116249766 | RLt36 | - | 15 Leu tRNA |
3341196 | 3341271 | - | 76 | 116249766 | RLt40 | - | 10 Lys tRNA |
3549879 | 3549954 | + | 76 | 116249766 | RLt42 | - | 16 Met tRNA |
3817118 | 3817194 | + | 77 | 116249766 | RLt16 | - | 11 Arg tRNA |
4085143 | 4085219 | - | 77 | 116249766 | RLt43 | - | 16 Met tRNA |
4085432 | 4085551 | - | 120 | 116249766 | RLr08 | - | 5S ribosomal RNA |
4085774 | 4088434 | - | 2661 | 116249766 | RLr05 | - | 23S ribosomal RNA |
4089276 | 4089351 | - | 76 | 116249766 | RLt12 | - | 02 Ala tRNA |
4089445 | 4089521 | - | 77 | 116249766 | RLt32 | - | 14 Ile tRNA |
4089893 | 4091334 | - | 1442 | 116249766 | RLr02 | - | 16S ribosomal RNA |
4180466 | 4180542 | - | 77 | 116249766 | RLt44 | - | 16 Met tRNA |
4329289 | 4329363 | + | 75 | 116249766 | RLt60 | - | 13 Val tRNA |
4540223 | 4540299 | - | 77 | 116249766 | RLt45 | - | 16 Met tRNA |
4540512 | 4540631 | - | 120 | 116249766 | RLr09 | - | 5S ribosomal RNA |
4540854 | 4543514 | - | 2661 | 116249766 | RLr06 | - | 23S ribosomal RNA |
4544356 | 4544431 | - | 76 | 116249766 | RLt13 | - | 02 Ala tRNA |
4544525 | 4544601 | - | 77 | 116249766 | RLt33 | - | 14 Ile tRNA |
4544973 | 4546414 | - | 1442 | 116249766 | RLr03 | - | 16S ribosomal RNA |
4578415 | 4578499 | + | 85 | 116249766 | RLt37 | - | 15 Leu tRNA |
4634822 | 4634898 | + | 77 | 116249766 | RLt17 | - | 11 Arg tRNA |
4851572 | 4851646 | + | 75 | 116249766 | RLt29 | - | 01 Gly tRNA |
4968492 | 4968581 | - | 90 | 116249766 | RLt53 | - | 08 Ser tRNA |
4980478 | 4980567 | - | 90 | 116249766 | RLt54 | - | 08 Ser tRNA |