Материалы:NC 008463

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_008463            6537648 bp    DNA     circular BCT 13-OCT-2006
   DEFINITION  Pseudomonas aeruginosa UCBPP-PA14, complete genome.
   ACCESSION   NC_008463
   VERSION     NC_008463.1  GI:116048575
   KEYWORDS    .
   SOURCE      Pseudomonas aeruginosa UCBPP-PA14
     ORGANISM  Pseudomonas aeruginosa UCBPP-PA14
               Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
               Pseudomonadaceae; Pseudomonas.
   REFERENCE   1  (bases 1 to 6537648)
     AUTHORS   Lee,D.G., Urbach,J.M., Wu,G., Liberati,N.T., Feinbaum,R.L.,
               Miyata,S., Diggins,L.T., He,J., Saucier,M., Deziel,E., Friedman,L.,
               Li,L., Grills,G., Montgomery,K., Kucherlapati,R., Rahme,L.G. and
               Ausubel,F.M.
     TITLE     Genomic analysis reveals that Pseudomonas aeruginosa virulence is
               combinatorial
     JOURNAL   (er) Genome Biol. 7 (10), R90 (2006)
      PUBMED   17038190
   REFERENCE   2  (bases 1 to 6537648)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (11-OCT-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 6537648)
     AUTHORS   Lee,D.G., Urbach,J.M., Wu,G., Liberati,N.T., Feinbaum,R.,
               Miyata,S., Diggins,L.T., He,J., Saucier,M., Deziel,E., Friedman,L.,
               Li,L., Grills,G., Montgomery,K., Kucherlapati,R., Rahme,L.G. and
               Ausubel,F.M.
     TITLE     Direct Submission
     JOURNAL   Submitted (18-AUG-2006) Department of Molecular Biology,
               Massachusetts General Hospital, Richard B. Simches Research Center,
               185 Cambridge Street, 7th Floor, Boston, MA 02114, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000438.
               COMPLETENESS: full length.
               Source DNA and bacteria available from Fred Ausubel at
               ausubel@molbio.mgh.harvard.edu.

Расположение РНК[править]

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
312961	313034	-	74	116048575	PA14_03410	-	^{11 Arg tRNA}
596840	596963	+	124	116048575	PA14_06875	-	rsmYregulatoryRNA
640410	640483	-	74	116048575	PA14_07470	-	^{16 Met tRNA}
733095	734620	+	1526	116048575	PA14_08570	-	16S ribosomal RNA
734686	734759	+	74	116048575	PA14_08580	-	^{14 Ile tRNA}
734791	734863	+	73	116048575	PA14_08590	-	^{02 Ala tRNA}
735093	737983	+	2891	116048575	PA14_08600	-	23S ribosomal RNA
738120	738251	+	132	116048575	PA14_08610	-	5S ribosomal RNA
740947	741028	+	82	116048575	PA14_08650	-	^{18 Tyr tRNA}
741058	741128	+	71	116048575	PA14_08660	-	^{01 Gly tRNA}
741151	741223	+	73	116048575	PA14_08670	-	^{12 Thr tRNA}
742560	742632	+	73	116048575	PA14_08690	-	^{20 Trp tRNA}
1244743	1244826	-	84	116048575	PA14_14570	-	^{15 Leu tRNA}
1760535	1760608	+	74	116048575	PA14_20500	-	^{11 Arg tRNA}
1896332	1896404	+	73	116048575	PA14_21800	-	^{13 Val tRNA}
1896424	1896497	+	74	116048575	PA14_21810	-	^{06 Asp tRNA}
2044203	2044275	-	73	116048575	PA14_23490	-	^{07 Asn tRNA}
2053367	2053439	+	73	116048575	PA14_23570	-	^{02 Ala tRNA}
2053489	2053561	+	73	116048575	PA14_23580	-	^{04 Glu tRNA}
2092473	2092545	+	73	116048575	PA14_24110	-	^{13 Val tRNA}
2092565	2092638	+	74	116048575	PA14_24120	-	^{06 Asp tRNA}
2092756	2092829	+	74	116048575	PA14_24130	-	^{06 Asp tRNA}
2174092	2174165	-	74	116048575	PA14_24870	-	^{03 Pro tRNA}
2362888	2362974	-	87	116048575	PA14_27190	-	^{08 Ser tRNA}
2395469	2395541	+	73	116048575	PA14_27600	-	^{04 Glu tRNA}
2395547	2395619	+	73	116048575	PA14_27610	-	^{01 Gly tRNA}
2395707	2395779	+	73	116048575	PA14_27620	-	^{01 Gly tRNA}
2440744	2440817	+	74	116048575	PA14_28190	-	^{13 Val tRNA}
2474588	2474661	+	74	116048575	PA14_28740	-	^{03 Pro tRNA}
2634238	2634324	+	87	116048575	PA14_30420	-	^{08 Ser tRNA}
2658638	2658710	+	73	116048575	PA14_30680	-	^{01 Gly tRNA}
2665032	2665102	+	71	116048575	PA14_30720	-	^{19 Cys tRNA}
3675521	3675594	-	74	116048575	PA14_41200	-	^{06 Asp tRNA}
3687017	3687098	-	82	116048575	PA14_41320	-	^{15 Leu tRNA}
3687156	3687228	-	73	116048575	PA14_41330	-	^{09 His tRNA}
3687283	3687356	-	74	116048575	PA14_41340	-	^{11 Arg tRNA}
4552978	4553064	-	87	116048575	PA14_51230	-	^{08 Ser tRNA}
4591106	4591178	-	73	116048575	PA14_51660	-	^{10 Lys tRNA}
4643754	4643827	+	74	116048575	PA14_52320	-	^{16 Met tRNA}
4659862	4659935	-	74	116048575	PA14_52540	-	^{11 Arg tRNA}
4660050	4660123	-	74	116048575	PA14_52550	-	^{11 Arg tRNA}
4660244	4660331	-	88	116048575	PA14_52560	-	^{08 Ser tRNA}
4860143	4860213	+	71	116048575	PA14_54840	-	^{01 Gly tRNA}
4952020	4952151	-	132	116048575	PA14_55620	-	5S ribosomal RNA
4952288	4955171	-	2884	116048575	PA14_55631	-	23S ribosomal RNA
4955401	4955473	-	73	116048575	PA14_55634	-	^{02 Ala tRNA}
4955505	4955578	-	74	116048575	PA14_55635	-	^{14 Ile tRNA}
4955644	4957169	-	1526	116048575	PA14_55637	-	16S ribosomal RNA
5232640	5232712	-	73	116048575	PA14_58710	-	^{12 Thr tRNA}
5359396	5359468	-	73	116048575	PA14_60150	-	^{10 Lys tRNA}
5359482	5359555	-	74	116048575	PA14_60160	-	^{03 Pro tRNA}
5359568	5359640	-	73	116048575	PA14_60180	-	^{07 Asn tRNA}
5403550	5403623	+	74	116048575	PA14_60620	-	^{11 Arg tRNA}
5510221	5510292	+	72	116048575	PA14_61760	-	^{05 Gln tRNA}
5513969	5514042	+	74	116048575	PA14_61830	-	^{16 Met tRNA}
5536028	5536159	-	132	116048575	PA14_62050	-	5S ribosomal RNA
5536295	5539185	-	2891	116048575	PA14_62060	-	23S ribosomal RNA
5539415	5539487	-	73	116048575	PA14_62070	-	^{02 Ala tRNA}
5539519	5539592	-	74	116048575	PA14_62080	-	^{14 Ile tRNA}
5539658	5541183	-	1526	116048575	PA14_62090	-	16S ribosomal RNA
5604020	5604093	-	74	116048575	PA14_62790	-	^{16 Met tRNA}
5604187	5604269	-	83	116048575	PA14_62800	-	^{15 Leu tRNA}
5658407	5658498	-	92	116048575	PA14_63460	-	Sec tRNA
5813004	5813087	+	84	116048575	PA14_65210	-	^{15 Leu tRNA}
5813220	5813303	+	84	116048575	PA14_65220	-	^{15 Leu tRNA}
6070731	6070803	+	73	116048575	PA14_68030	-	^{17 Phe tRNA}
6082141	6082213	+	73	116048575	PA14_68150	-	^{12 Thr tRNA}
6312498	6312629	-	132	116048575	PA14_70870	-	5S ribosomal RNA
6312766	6315656	-	2891	116048575	PA14_70880	-	23S ribosomal RNA
6315886	6315958	-	73	116048575	PA14_70890	-	^{02 Ala tRNA}
6315990	6316063	-	74	116048575	PA14_70900	-	^{14 Ile tRNA}
6316129	6317654	-	1526	116048575	PA14_70910	-	16S ribosomal RNA