Материалы:NC 008570
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LOCUS NC_008570 4744448 bp DNA circular BCT 14-AUG-2007 DEFINITION Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome. ACCESSION NC_008570 VERSION NC_008570.1 GI:117617447 KEYWORDS . SOURCE Aeromonas hydrophila subsp. hydrophila ATCC 7966 ORGANISM Aeromonas hydrophila subsp. hydrophila ATCC 7966 Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas. REFERENCE 1 (bases 1 to 4744448) AUTHORS Seshadri,R., Joseph,S.W., Chopra,A.K., Sha,J., Shaw,J., Graf,J., Haft,D., Wu,M., Ren,Q., Rosovitz,M., Madupu,R., Tallon,L., Kim,M., Jin,S., Vuong,H., Stine,O.C., Ali,A., Horneman,A.J. and Heidelberg,J.F. TITLE Genome Sequence of Aeromonas hydrophila ATCC 7966T: The Jack of All Trades JOURNAL (er) J. Bacteriol. (2006) In press PUBMED 16980456 REFERENCE 2 (bases 1 to 4744448) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-NOV-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4744448) AUTHORS Seshadri,R., Joseph,S.W., Chopra,A.K., Shaw,J., Graf,J., Haft,D., Wu,M., Rosovitz,M., Madupu,R., Tallon,L., Kim,M., Jin,S., Vuong,H., Stine,O.C., Ali,A., Horneman,A.J. and Heidelberg,J.F. TITLE Direct Submission JOURNAL Submitted (06-SEP-2006) The Institute for Genomic Research, 9712 Medical Center Dr., Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000462. COMPLETENESS: full length.
Расположение РНК
[править]Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
29246 | 29322 | + | 77 | 117617447 | AHA_0024 | - | 11 Arg tRNA |
29373 | 29448 | + | 76 | 117617447 | AHA_0025 | - | 09 His tRNA |
29469 | 29554 | + | 86 | 117617447 | AHA_0026 | - | 15 Leu tRNA |
29628 | 29704 | + | 77 | 117617447 | AHA_0027 | - | 03 Pro tRNA |
85174 | 86723 | + | 1550 | 117617447 | AHA_0077 | - | 16S ribosomal RNA |
86944 | 87019 | + | 76 | 117617447 | AHA_0078 | - | 04 Glu tRNA |
87259 | 90147 | + | 2889 | 117617447 | AHA_0079 | - | 23S ribosomal RNA |
90259 | 90389 | + | 131 | 117617447 | AHA_0080 | - | 5S ribosomal RNA |
90487 | 90562 | + | 76 | 117617447 | AHA_0081 | - | 12 Thr tRNA |
163372 | 164921 | + | 1550 | 117617447 | AHA_0145 | - | 16S ribosomal RNA |
165116 | 165191 | + | 76 | 117617447 | AHA_0146 | - | 04 Glu tRNA |
165428 | 168316 | + | 2889 | 117617447 | AHA_0147 | - | 23S ribosomal RNA |
168426 | 168556 | + | 131 | 117617447 | AHA_0148 | - | 5S ribosomal RNA |
214907 | 216456 | + | 1550 | 117617447 | AHA_0198 | - | 16S ribosomal RNA |
216523 | 216599 | + | 77 | 117617447 | AHA_0199 | - | 14 Ile tRNA |
216610 | 216685 | + | 76 | 117617447 | AHA_0200 | - | 02 Ala tRNA |
216926 | 219814 | + | 2889 | 117617447 | AHA_0201 | - | 23S ribosomal RNA |
219923 | 220053 | + | 131 | 117617447 | AHA_0201a | - | 5S ribosomal RNA |
220152 | 220227 | + | 76 | 117617447 | AHA_0202 | - | 12 Thr tRNA |
220249 | 220368 | + | 120 | 117617447 | AHA_0203 | - | 5S ribosomal RNA |
349946 | 351495 | + | 1550 | 117617447 | AHA_0335 | - | 16S ribosomal RNA |
351690 | 351765 | + | 76 | 117617447 | AHA_0336 | - | 04 Glu tRNA |
352002 | 354890 | + | 2889 | 117617447 | AHA_0337 | - | 23S ribosomal RNA |
354966 | 355085 | + | 120 | 117617447 | AHA_0338 | - | 5S ribosomal RNA |
355180 | 355256 | + | 77 | 117617447 | AHA_0339 | - | 06 Asp tRNA |
803843 | 805392 | + | 1550 | 117617447 | AHA_0752 | - | 16S ribosomal RNA |
805590 | 805665 | + | 76 | 117617447 | AHA_0753 | - | 04 Glu tRNA |
805904 | 808792 | + | 2889 | 117617447 | AHA_0754 | - | 23S ribosomal RNA |
808907 | 809026 | + | 120 | 117617447 | AHA_0755 | - | 5S ribosomal RNA |
809122 | 809198 | + | 77 | 117617447 | AHA_0756 | - | 06 Asp tRNA |
897169 | 897245 | + | 77 | 117617447 | AHA_0836 | - | 16 Met tRNA |
933020 | 934569 | + | 1550 | 117617447 | AHA_0865 | - | 16S ribosomal RNA |
934767 | 934842 | + | 76 | 117617447 | AHA_0866 | - | 04 Glu tRNA |
935081 | 937969 | + | 2889 | 117617447 | AHA_0867 | - | 23S ribosomal RNA |
938079 | 938209 | + | 131 | 117617447 | AHA_0868 | - | 5S ribosomal RNA |
1108232 | 1108316 | - | 85 | 117617447 | AHA_1026 | - | 18 Tyr tRNA |
1108348 | 1108432 | - | 85 | 117617447 | AHA_1027 | - | 18 Tyr tRNA |
1108464 | 1108548 | - | 85 | 117617447 | AHA_1028 | - | 18 Tyr tRNA |
1187027 | 1187103 | - | 77 | 117617447 | AHA_1088 | - | 11 Arg tRNA |
1210105 | 1210192 | + | 88 | 117617447 | AHA_1116 | - | 08 Ser tRNA |
1432952 | 1433041 | + | 90 | 117617447 | AHA_1319 | - | 08 Ser tRNA |
1457945 | 1458020 | - | 76 | 117617447 | AHA_1343 | - | 12 Thr tRNA |
1577701 | 1578060 | - | 360 | 117617447 | AHA_1442 | - | 10Sa RNA (tmRNA) |
1702438 | 1702522 | - | 85 | 117617447 | AHA_1555 | - | 18 Tyr tRNA |
1702574 | 1702658 | - | 85 | 117617447 | AHA_1556 | - | 18 Tyr tRNA |
1955468 | 1955555 | - | 88 | 117617447 | AHA_1785 | - | 08 Ser tRNA |
1989214 | 1989301 | + | 88 | 117617447 | AHA_1825 | - | 08 Ser tRNA |
2026838 | 2026913 | - | 76 | 117617447 | AHA_1851 | - | 09 His tRNA |
2026963 | 2027039 | - | 77 | 117617447 | AHA_1852 | - | 11 Arg tRNA |
2027076 | 2027152 | - | 77 | 117617447 | AHA_1853 | - | 03 Pro tRNA |
2322629 | 2322705 | - | 77 | 117617447 | AHA_2108 | - | 13 Val tRNA |
2322743 | 2322819 | - | 77 | 117617447 | AHA_2109 | - | 13 Val tRNA |
2322825 | 2322902 | - | 78 | 117617447 | AHA_2110 | - | Xaa tRNA |
2322941 | 2323017 | - | 77 | 117617447 | AHA_2111 | - | 13 Val tRNA |
2323035 | 2323111 | - | 77 | 117617447 | AHA_2112 | - | 13 Val tRNA |
2323124 | 2323200 | - | 77 | 117617447 | AHA_2113 | - | 13 Val tRNA |
2639183 | 2639259 | - | 77 | 117617447 | AHA_2387 | - | 16 Met tRNA |
2639357 | 2639433 | - | 77 | 117617447 | AHA_2388 | - | 16 Met tRNA |
2639530 | 2639606 | - | 77 | 117617447 | AHA_2389 | - | 16 Met tRNA |
2639703 | 2639779 | - | 77 | 117617447 | AHA_2390 | - | 16 Met tRNA |
2639876 | 2639952 | - | 77 | 117617447 | AHA_2391 | - | 16 Met tRNA |
2640049 | 2640125 | - | 77 | 117617447 | AHA_2392 | - | 16 Met tRNA |
2640222 | 2640298 | - | 77 | 117617447 | AHA_2393 | - | 16 Met tRNA |
2640391 | 2640467 | - | 77 | 117617447 | AHA_2394 | - | 16 Met tRNA |
2702867 | 2702942 | + | 76 | 117617447 | AHA_2449 | - | 07 Asn tRNA |
2791529 | 2791616 | + | 88 | 117617447 | AHA_2507 | - | Sec tRNA |
2826979 | 2827066 | - | 88 | 117617447 | AHA_2539 | - | 08 Ser tRNA |
2829543 | 2829618 | + | 76 | 117617447 | AHA_2541 | - | 07 Asn tRNA |
2829621 | 2829696 | + | 76 | 117617447 | AHA_2542 | - | 07 Asn tRNA |
2900868 | 2900944 | + | 77 | 117617447 | AHA_2603 | - | 03 Pro tRNA |
2983700 | 2983787 | - | 88 | 117617447 | AHA_2673 | - | 08 Ser tRNA |
3111150 | 3111236 | - | 87 | 117617447 | AHA_2769 | - | 15 Leu tRNA |
3111278 | 3111351 | - | 74 | 117617447 | AHA_2770 | - | 19 Cys tRNA |
3111386 | 3111461 | - | 76 | 117617447 | AHA_2771 | - | 01 Gly tRNA |
3162154 | 3162230 | + | 77 | 117617447 | AHA_2815 | - | 03 Pro tRNA |
3414420 | 3414494 | - | 75 | 117617447 | AHA_3027 | - | 01 Gly tRNA |
3414589 | 3414662 | - | 74 | 117617447 | AHA_3028 | - | 01 Gly tRNA |
3487450 | 3487523 | - | 74 | 117617447 | AHA_3090 | - | 19 Cys tRNA |
3487579 | 3487654 | - | 76 | 117617447 | AHA_3091 | - | 01 Gly tRNA |
3566154 | 3566228 | + | 75 | 117617447 | AHA_3153 | - | 05 Gln tRNA |
3571935 | 3572011 | + | 77 | 117617447 | AHA_3158 | - | 16 Met tRNA |
3572020 | 3572094 | + | 75 | 117617447 | AHA_3159 | - | 05 Gln tRNA |
3572241 | 3572315 | + | 75 | 117617447 | AHA_3160 | - | 05 Gln tRNA |
3572357 | 3572431 | + | 75 | 117617447 | AHA_3161 | - | 05 Gln tRNA |
3572470 | 3572546 | + | 77 | 117617447 | AHA_3162 | - | 16 Met tRNA |
3572592 | 3572666 | + | 75 | 117617447 | AHA_3163 | - | 05 Gln tRNA |
3572703 | 3572779 | + | 77 | 117617447 | AHA_3164 | - | 16 Met tRNA |
3572788 | 3572871 | + | 84 | 117617447 | AHA_3165 | - | 15 Leu tRNA |
3727432 | 3727508 | - | 77 | 117617447 | AHA_3306 | - | 16 Met tRNA |
3727601 | 3727685 | - | 85 | 117617447 | AHA_3307 | - | 15 Leu tRNA |
3875715 | 3875790 | - | 76 | 117617447 | AHA_3442 | - | 02 Ala tRNA |
3875825 | 3875900 | - | 76 | 117617447 | AHA_3443 | - | 02 Ala tRNA |
3875949 | 3876024 | - | 76 | 117617447 | AHA_3444 | - | 02 Ala tRNA |
3876088 | 3876163 | - | 76 | 117617447 | AHA_3445 | - | 02 Ala tRNA |
3876192 | 3876267 | - | 76 | 117617447 | AHA_3446 | - | 02 Ala tRNA |
3881802 | 3881881 | - | 80 | 117617447 | AHA_3451 | - | Xaa tRNA |
3881945 | 3882020 | - | 76 | 117617447 | AHA_3452 | - | 01 Gly tRNA |
3882045 | 3882120 | - | 76 | 117617447 | AHA_3453 | - | 01 Gly tRNA |
3882145 | 3882220 | - | 76 | 117617447 | AHA_3454 | - | 01 Gly tRNA |
3882245 | 3882320 | - | 76 | 117617447 | AHA_3455 | - | 01 Gly tRNA |
3882345 | 3882420 | - | 76 | 117617447 | AHA_3456 | - | 01 Gly tRNA |
3882454 | 3882529 | - | 76 | 117617447 | AHA_3457 | - | 01 Gly tRNA |
3882555 | 3882630 | - | 76 | 117617447 | AHA_3458 | - | 01 Gly tRNA |
3894370 | 3894445 | + | 76 | 117617447 | AHA_3472 | - | 17 Phe tRNA |
3894450 | 3894525 | + | 76 | 117617447 | AHA_3473 | - | 07 Asn tRNA |
3951574 | 3951693 | - | 120 | 117617447 | AHA_3513 | - | 5S ribosomal RNA |
3951808 | 3954696 | - | 2889 | 117617447 | AHA_3514 | - | 23S ribosomal RNA |
3954933 | 3955008 | - | 76 | 117617447 | AHA_3515 | - | 04 Glu tRNA |
3955208 | 3956757 | - | 1550 | 117617447 | AHA_3516 | - | 16S ribosomal RNA |
4068512 | 4068587 | - | 76 | 117617447 | AHA_3622 | - | 13 Val tRNA |
4068605 | 4068680 | - | 76 | 117617447 | AHA_3623 | - | 10 Lys tRNA |
4068703 | 4068778 | - | 76 | 117617447 | AHA_3624 | - | 13 Val tRNA |
4068796 | 4068871 | - | 76 | 117617447 | AHA_3625 | - | 10 Lys tRNA |
4068895 | 4068970 | - | 76 | 117617447 | AHA_3626 | - | 13 Val tRNA |
4068987 | 4069062 | - | 76 | 117617447 | AHA_3627 | - | 10 Lys tRNA |
4069087 | 4069162 | - | 76 | 117617447 | AHA_3628 | - | 13 Val tRNA |
4069179 | 4069254 | - | 76 | 117617447 | AHA_3629 | - | 10 Lys tRNA |
4069277 | 4069352 | - | 76 | 117617447 | AHA_3630 | - | 13 Val tRNA |
4069370 | 4069445 | - | 76 | 117617447 | AHA_3631 | - | 10 Lys tRNA |
4069469 | 4069544 | - | 76 | 117617447 | AHA_3632 | - | 13 Val tRNA |
4069566 | 4069641 | - | 76 | 117617447 | AHA_3633 | - | 10 Lys tRNA |
4069690 | 4069765 | - | 76 | 117617447 | AHA_3634 | - | 13 Val tRNA |
4069797 | 4069872 | - | 76 | 117617447 | AHA_3635 | - | 10 Lys tRNA |
4129664 | 4129749 | - | 86 | 117617447 | AHA_3696 | - | 15 Leu tRNA |
4141607 | 4141683 | - | 77 | 117617447 | AHA_3706 | - | 11 Arg tRNA |
4141712 | 4141788 | - | 77 | 117617447 | AHA_3707 | - | 11 Arg tRNA |
4141817 | 4141893 | - | 77 | 117617447 | AHA_3708 | - | 11 Arg tRNA |
4141920 | 4141996 | - | 77 | 117617447 | AHA_3709 | - | 11 Arg tRNA |
4142096 | 4142172 | - | 77 | 117617447 | AHA_3710 | - | 11 Arg tRNA |
4142176 | 4142268 | - | 93 | 117617447 | AHA_3711 | - | 08 Ser tRNA |
4234485 | 4234570 | + | 86 | 117617447 | AHA_3805 | - | 15 Leu tRNA |
4234626 | 4234711 | + | 86 | 117617447 | AHA_3806 | - | 15 Leu tRNA |
4234756 | 4234841 | + | 86 | 117617447 | AHA_3807 | - | 15 Leu tRNA |
4234887 | 4234972 | + | 86 | 117617447 | AHA_3808 | - | 15 Leu tRNA |
4235044 | 4235129 | + | 86 | 117617447 | AHA_3809 | - | 15 Leu tRNA |
4268521 | 4268596 | - | 76 | 117617447 | AHA_3842 | - | 07 Asn tRNA |
4268642 | 4268717 | - | 76 | 117617447 | AHA_3843 | - | 17 Phe tRNA |
4268721 | 4268796 | - | 76 | 117617447 | AHA_3844 | - | 12 Thr tRNA |
4268849 | 4268924 | - | 76 | 117617447 | AHA_3845 | - | 17 Phe tRNA |
4366322 | 4366441 | - | 120 | 117617447 | AHA_3940 | - | 5S ribosomal RNA |
4366517 | 4369405 | - | 2889 | 117617447 | AHA_3941 | - | 23S ribosomal RNA |
4369644 | 4369719 | - | 76 | 117617447 | AHA_3942 | - | 02 Ala tRNA |
4369730 | 4369806 | - | 77 | 117617447 | AHA_3943 | - | 14 Ile tRNA |
4369875 | 4371424 | - | 1550 | 117617447 | AHA_3944 | - | 16S ribosomal RNA |
4449170 | 4449246 | - | 77 | 117617447 | AHA_4011 | - | 06 Asp tRNA |
4449344 | 4449463 | - | 120 | 117617447 | AHA_4012 | - | 5S ribosomal RNA |
4449539 | 4452427 | - | 2889 | 117617447 | AHA_4013 | - | 23S ribosomal RNA |
4452666 | 4452741 | - | 76 | 117617447 | AHA_4014 | - | 02 Ala tRNA |
4452752 | 4452828 | - | 77 | 117617447 | AHA_4015 | - | 14 Ile tRNA |
4452897 | 4454446 | - | 1550 | 117617447 | AHA_4016 | - | 16S ribosomal RNA |
4474578 | 4474654 | - | 77 | 117617447 | AHA_4035 | - | 20 Trp tRNA |
4476064 | 4476138 | - | 75 | 117617447 | AHA_4037 | - | 01 Gly tRNA |
4476177 | 4476261 | - | 85 | 117617447 | AHA_4038 | - | 18 Tyr tRNA |
4526310 | 4526386 | - | 77 | 117617447 | AHA_4085 | - | 20 Trp tRNA |
4579858 | 4579934 | - | 77 | 117617447 | AHA_4132 | - | 03 Pro tRNA |
4697520 | 4697596 | - | 77 | 117617447 | AHA_4242 | - | 06 Asp tRNA |
4697694 | 4697813 | - | 120 | 117617447 | AHA_4243 | - | 5S ribosomal RNA |
4697928 | 4700816 | - | 2889 | 117617447 | AHA_4244 | - | 23S ribosomal RNA |
4701054 | 4701129 | - | 76 | 117617447 | AHA_4245 | - | 04 Glu tRNA |
4701326 | 4702875 | - | 1550 | 117617447 | AHA_4246 | - | 16S ribosomal RNA |