Материалы:NC 009348

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009348            4702402 bp    DNA     circular BCT 09-AUG-2007
   DEFINITION  Aeromonas salmonicida subsp. salmonicida A449, complete genome.
   ACCESSION   NC_009348
   VERSION     NC_009348.1  GI:145297124
   KEYWORDS    .
   SOURCE      Aeromonas salmonicida subsp. salmonicida A449
     ORGANISM  Aeromonas salmonicida subsp. salmonicida A449
               Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales;
               Aeromonadaceae; Aeromonas.
   REFERENCE   1  (bases 1 to 4702402)
     AUTHORS   Reith,M.E., Singh,R.K., Curtis,B., Boyd,J., Bouevitch,A.,
               Kimball,J., Munholland,J., Murphy,C., Sarty,D., Williams,J.,
               Nash,J., Johnson,S. and Brown,L.
     TITLE     The genome sequence of Aeromonas salmonicida subsp. salmonicida
               A449
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 4702402)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (17-APR-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4702402)
     AUTHORS   Reith,M.E., Singh,R.K., Curtis,B., Boyd,J., Bouevitch,A.,
               Kimball,J., Munholland,J., Murphy,C., Sarty,D., Williams,J.,
               Nash,J., Johnson,S. and Brown,L.
     TITLE     Direct Submission
     JOURNAL   Submitted (23-MAR-2007) NRC Institute for Marine Biosciences, 1411
               Oxford St., Halifax, Nova Scotia B3H 3Z1, Canada
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000644.
               Source DNA is available from Michael Reith:
               michael.reith@nrc-cnrc.gc.ca.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
32107	32183	+	77	145297124	ASA_0026	-	^{11 Arg tRNA}
32234	32309	+	76	145297124	ASA_0027	-	^{09 His tRNA}
32330	32415	+	86	145297124	ASA_0028	-	^{15 Leu tRNA}
32493	32569	+	77	145297124	ASA_0029	-	^{03 Pro tRNA}
83340	84889	+	1550	145297124	ASA_0079	-	16S ribosomal RNA
85084	85159	+	76	145297124	ASA_0080	-	^{04 Glu tRNA}
85397	88286	+	2890	145297124	ASA_0081	-	23S ribosomal RNA
88412	88530	+	119	145297124	ASA_0082	-	5S ribosomal RNA
88626	88702	+	77	145297124	ASA_0083	-	^{06 Asp tRNA}
190811	190887	+	77	145297124	ASA_0180	-	^{03 Pro tRNA}
197364	197516	+	153	145297124	ASA_0188	-	rhyB sRNA
232825	233093	-	269	145297124	ASA_0218	-	csrC sRNA
243581	243657	+	77	145297124	ASA_0230	-	^{20 Trp tRNA}
291431	291515	+	85	145297124	ASA_0273	-	^{18 Tyr tRNA}
291554	291628	+	75	145297124	ASA_0274	-	^{01 Gly tRNA}
293041	293117	+	77	145297124	ASA_0276	-	Xaa tRNA
313289	314838	+	1550	145297124	ASA_0295	-	16S ribosomal RNA
315033	315108	+	76	145297124	ASA_0296	-	^{04 Glu tRNA}
315346	318235	+	2890	145297124	ASA_0297	-	23S ribosomal RNA
318360	318479	+	120	145297124	ASA_0298	-	5S ribosomal RNA
358078	358388	+	311	145297124	ASA_0345	-	RNAse P RNA component
456383	456458	+	76	145297124	ASA_0440	-	^{17 Phe tRNA}
456510	456585	+	76	145297124	ASA_0441	-	^{12 Thr tRNA}
456596	456671	+	76	145297124	ASA_0442	-	^{17 Phe tRNA}
456680	456755	+	76	145297124	ASA_0443	-	^{07 Asn tRNA}
468166	468233	+	68	145297124	ASA_0457	-	^{15 Leu tRNA}
502342	502427	-	86	145297124	ASA_0491	-	^{15 Leu tRNA}
502499	502584	-	86	145297124	ASA_0492	-	^{15 Leu tRNA}
502629	502714	-	86	145297124	ASA_0493	-	^{15 Leu tRNA}
502759	502843	-	85	145297124	ASA_0494	-	^{15 Leu tRNA}
502897	502982	-	86	145297124	ASA_0495	-	^{15 Leu tRNA}
766339	766414	+	76	145297124	ASA_0748	-	^{10 Lys tRNA}
766445	766520	+	76	145297124	ASA_0749	-	^{13 Val tRNA}
766579	766654	+	76	145297124	ASA_0750	-	^{10 Lys tRNA}
766676	766751	+	76	145297124	ASA_0751	-	^{13 Val tRNA}
766774	766849	+	76	145297124	ASA_0752	-	^{10 Lys tRNA}
766868	766943	+	76	145297124	ASA_0753	-	^{13 Val tRNA}
766967	767042	+	76	145297124	ASA_0754	-	^{10 Lys tRNA}
767061	767136	+	76	145297124	ASA_0755	-	^{13 Val tRNA}
819412	820961	+	1550	145297124	ASA_0801	-	16S ribosomal RNA
821029	821105	+	77	145297124	ASA_0802	-	^{14 Ile tRNA}
821126	821201	+	76	145297124	ASA_0803	-	^{02 Ala tRNA}
821443	824332	+	2890	145297124	ASA_0804	-	23S ribosomal RNA
824457	824576	+	120	145297124	ASA_0805	-	5S ribosomal RNA
880361	880436	-	76	145297124	ASA_0847	-	^{07 Asn tRNA}
880442	880517	-	76	145297124	ASA_0848	-	^{17 Phe tRNA}
890391	890466	+	76	145297124	ASA_0859	-	^{01 Gly tRNA}
890503	890578	+	76	145297124	ASA_0860	-	^{01 Gly tRNA}
890614	890689	+	76	145297124	ASA_0861	-	^{01 Gly tRNA}
890726	890801	+	76	145297124	ASA_0862	-	^{01 Gly tRNA}
890828	890903	+	76	145297124	ASA_0863	-	^{01 Gly tRNA}
896653	896728	+	76	145297124	ASA_0868	-	^{02 Ala tRNA}
896757	896832	+	76	145297124	ASA_0869	-	^{02 Ala tRNA}
896881	896956	+	76	145297124	ASA_0870	-	^{02 Ala tRNA}
897005	897080	+	76	145297124	ASA_0871	-	^{02 Ala tRNA}
1035796	1035880	+	85	145297124	ASA_1006	-	^{15 Leu tRNA}
1035973	1036049	+	77	145297124	ASA_1007	-	^{16 Met tRNA}
1200337	1200421	-	85	145297124	ASA_1155	-	^{15 Leu tRNA}
1200430	1200506	-	77	145297124	ASA_1156	-	^{16 Met tRNA}
1200665	1200739	-	75	145297124	ASA_1157	-	^{05 Gln tRNA}
1200753	1200829	-	77	145297124	ASA_1158	-	^{16 Met tRNA}
1200964	1201038	-	75	145297124	ASA_1159	-	^{05 Gln tRNA}
1201079	1201153	-	75	145297124	ASA_1160	-	^{05 Gln tRNA}
1201194	1201268	-	75	145297124	ASA_1161	-	^{05 Gln tRNA}
1201282	1201358	-	77	145297124	ASA_1162	-	^{16 Met tRNA}
1210668	1210742	-	75	145297124	ASA_1171	-	^{05 Gln tRNA}
1352749	1352838	+	90	145297124	ASA_1302	-	^{08 Ser tRNA}
1368819	1368894	-	76	145297124	ASA_1315	-	^{12 Thr tRNA}
1587348	1587424	-	77	145297124	ASA_1517	-	^{03 Pro tRNA}
1635316	1635391	+	76	145297124	ASA_1558	-	^{01 Gly tRNA}
1635427	1635500	+	74	145297124	ASA_1559	-	^{19 Cys tRNA}
1635542	1635628	+	87	145297124	ASA_1560	-	^{15 Leu tRNA}
1792868	1792944	-	77	145297124	ASA_1708	-	^{03 Pro tRNA}
1827895	1827982	-	88	145297124	ASA_1739	-	^{08 Ser tRNA}
1866847	1866934	+	88	145297124	ASA_1785	-	^{08 Ser tRNA}
1890712	1890799	-	88	145297124	ASA_1807	-	Sec tRNA
2041045	2041144	+	100	145297124	ASA_1921	-	signal recognition particle RNA component
2319528	2319604	+	77	145297124	ASA_2187	-	^{13 Val tRNA}
2319618	2319694	+	77	145297124	ASA_2188	-	^{13 Val tRNA}
2319713	2319789	+	77	145297124	ASA_2189	-	^{13 Val tRNA}
2378255	2378331	-	77	145297124	ASA_2244	-	^{16 Met tRNA}
2378433	2378509	-	77	145297124	ASA_2245	-	^{16 Met tRNA}
2378611	2378687	-	77	145297124	ASA_2246	-	^{16 Met tRNA}
2378790	2378866	-	77	145297124	ASA_2247	-	^{16 Met tRNA}
2378968	2379044	-	77	145297124	ASA_2248	-	^{16 Met tRNA}
2379147	2379223	-	77	145297124	ASA_2249	-	^{16 Met tRNA}
2379317	2379393	-	77	145297124	ASA_2250	-	^{16 Met tRNA}
2442944	2443019	+	76	145297124	ASA_2307	-	^{07 Asn tRNA}
2613401	2613477	+	77	145297124	ASA_2450	-	^{03 Pro tRNA}
2613515	2613591	+	77	145297124	ASA_2451	-	^{11 Arg tRNA}
2613644	2613719	+	76	145297124	ASA_2452	-	^{09 His tRNA}
2638576	2638663	-	88	145297124	ASA_2473	-	^{08 Ser tRNA}
2641243	2641318	+	76	145297124	ASA_2475	-	^{07 Asn tRNA}
2641321	2641396	+	76	145297124	ASA_2476	-	^{07 Asn tRNA}
2693891	2693978	-	88	145297124	ASA_2524	-	^{08 Ser tRNA}
2821324	2821505	+	182	145297124	ASA_2638	-	6S RNA
3001139	3001223	+	85	145297124	ASA_2801	-	^{18 Tyr tRNA}
3145941	3146300	+	360	145297124	ASA_2923	-	tmRNA
3283336	3283410	-	75	145297124	ASA_3048	-	^{01 Gly tRNA}
3283511	3283584	-	74	145297124	ASA_3049	-	^{01 Gly tRNA}
3340511	3340584	-	74	145297124	ASA_3097	-	^{19 Cys tRNA}
3340641	3340716	-	76	145297124	ASA_3098	-	^{01 Gly tRNA}
3422976	3423131	-	156	145297124	ASA_3161	-	t44 sRNA
3484042	3484129	-	88	145297124	ASA_3214	-	^{08 Ser tRNA}
3507115	3507191	+	77	145297124	ASA_3242	-	^{11 Arg tRNA}
3541098	3541182	+	85	145297124	ASA_3274	-	^{18 Tyr tRNA}
3541222	3541306	+	85	145297124	ASA_3275	-	^{18 Tyr tRNA}
3541351	3541435	+	85	145297124	ASA_3276	-	^{18 Tyr tRNA}
3704771	3704892	-	122	145297124	ASA_3422	-	5S ribosomal RNA
3705015	3707906	-	2892	145297124	ASA_3423	-	23S ribosomal RNA
3708142	3708217	-	76	145297124	ASA_3424	-	^{04 Glu tRNA}
3708412	3709961	-	1550	145297124	ASA_3425	-	16S ribosomal RNA
3750467	3750543	-	77	145297124	ASA_3460	-	^{16 Met tRNA}
3888140	3888216	-	77	145297124	ASA_3595	-	^{06 Asp tRNA}
3888312	3888433	-	122	145297124	ASA_3596	-	5S ribosomal RNA
3888556	3891446	-	2891	145297124	ASA_3597	-	23S ribosomal RNA
3891682	3891757	-	76	145297124	ASA_3598	-	^{04 Glu tRNA}
3891952	3893501	-	1550	145297124	ASA_3599	-	16S ribosomal RNA
4107096	4107188	+	93	145297124	ASA_3814	-	^{08 Ser tRNA}
4107192	4107268	+	77	145297124	ASA_3815	-	^{11 Arg tRNA}
4107296	4107372	+	77	145297124	ASA_3816	-	^{11 Arg tRNA}
4107399	4107475	+	77	145297124	ASA_3817	-	^{11 Arg tRNA}
4119115	4119200	+	86	145297124	ASA_3827	-	^{15 Leu tRNA}
4285409	4285802	+	394	145297124	ASA_3990	-	csrB sRNA
4358307	4358383	-	77	145297124	ASA_4056	-	^{06 Asp tRNA}
4358479	4358600	-	122	145297124	ASA_4057	-	5S ribosomal RNA
4358723	4361614	-	2892	145297124	ASA_4058	-	23S ribosomal RNA
4361850	4361925	-	76	145297124	ASA_4059	-	^{04 Glu tRNA}
4362120	4363669	-	1550	145297124	ASA_4060	-	16S ribosomal RNA
4423345	4423458	-	114	145297124	ASA_4130	-	spot 42 sRNA
4482279	4482403	-	125	145297124	ASA_4186b	-	5S ribosomal RNA
4482417	4482492	-	76	145297124	ASA_4186	-	^{12 Thr tRNA}
4482592	4482716	-	125	145297124	ASA_4188	-	5S ribosomal RNA
4482841	4485732	-	2892	145297124	ASA_4189	-	23S ribosomal RNA
4485972	4486047	-	76	145297124	ASA_4190	-	^{02 Ala tRNA}
4486068	4486144	-	77	145297124	ASA_4191	-	^{14 Ile tRNA}
4486212	4487761	-	1550	145297124	ASA_4192	-	16S ribosomal RNA
4533763	4533884	-	122	145297124	ASA_4241	-	5S ribosomal RNA
4534007	4536898	-	2892	145297124	ASA_4242	-	23S ribosomal RNA
4537134	4537209	-	76	145297124	ASA_4243	-	^{04 Glu tRNA}
4537404	4538953	-	1550	145297124	ASA_4244	-	16S ribosomal RNA
4613098	4613173	-	76	145297124	ASA_4312	-	^{12 Thr tRNA}
4613273	4613397	-	125	145297124	ASA_4313	-	5S ribosomal RNA
4613522	4616413	-	2892	145297124	ASA_4314	-	23S ribosomal RNA
4616653	4616728	-	76	145297124	ASA_4315	-	^{02 Ala tRNA}
4616749	4616825	-	77	145297124	ASA_4316	-	^{14 Ile tRNA}
4616893	4618442	-	1550	145297124	ASA_4317	-	16S ribosomal RNA